Jatropha Genome Database

JcCA0282441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0282441.10 + phase: 2 /pseudo/partial
         (279 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004503 beta-hexosaminidase, putative                           368   e-102
28180.m000377 beta-hexosaminidase, putative                           169   1e-42
28180.m000376 beta-hexosaminidase, putative                            71   6e-13
29616.m000216 beta-hexosaminidase, putative                            70   1e-12

>29929.m004503 beta-hexosaminidase, putative
          Length = 527

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/279 (65%), Positives = 198/279 (70%), Gaps = 23/279 (8%)

Query: 1   GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
           GKGYPSLWPSKDC+QPLDVSNEFTFKVIDGILSDFS        HLGGDEVDTSCW+ST 
Sbjct: 272 GKGYPSLWPSKDCQQPLDVSNEFTFKVIDGILSDFSKIFKFKFVHLGGDEVDTSCWTSTP 331

Query: 61  RIQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXAD 120
            I  WL+KH  N S+AYQYFVLRAQ+IALSHGYEI+NWEETFN+FGNKLSRKTVVHN   
Sbjct: 332 HIMNWLKKHNRNESEAYQYFVLRAQQIALSHGYEIVNWEETFNSFGNKLSRKTVVHN--- 388

Query: 121 PLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMN 180
                                L            LRCIVSNQD+WYLDHLDT+W++FYMN
Sbjct: 389 --------------------WLGGGVAQQVVASGLRCIVSNQDQWYLDHLDTTWQEFYMN 428

Query: 181 EPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTH 240
           EPL NI + EQQ+LVIGGEVCMWGE VD S+IEQTIWPRAAAAAERLWT YDKLAK+P  
Sbjct: 429 EPLTNITNIEQQKLVIGGEVCMWGETVDASNIEQTIWPRAAAAAERLWTSYDKLAKNPRE 488

Query: 241 VTRRLAHFRCLLNQXXXXXXXXXXXXXXXXXXXXSCYSQ 279
           VT RLAHFRCLLNQ                    SCY Q
Sbjct: 489 VTGRLAHFRCLLNQRGVAAAPVAGPGRGAPLEPGSCYLQ 527


>28180.m000377 beta-hexosaminidase, putative
          Length = 211

 Score =  169 bits (428), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/195 (45%), Positives = 117/195 (60%), Gaps = 25/195 (12%)

Query: 62  IQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWEETFNNFGNKLSRKTVVHNXADP 121
           +++ L  H +    AY+YFVLRAQ+IA+S G+  +NWEETFN F + L  +T+VHN    
Sbjct: 14  LEELLRDHNLTTKDAYKYFVLRAQEIAISKGWTPVNWEETFNTFASSLHPRTIVHN---- 69

Query: 122 LTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIVSNQDKWYLDHLDTSWEKFYMNE 181
                 +   VC+                     RCI SNQ  WYLDHLD  W + Y  E
Sbjct: 70  -----WLGGGVCA--------------KAVAKGFRCIFSNQGFWYLDHLDVPWYEVYNAE 110

Query: 182 PLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPRAAAAAERLWTPYDKLAKDPTHV 241
           PL  I++  +Q+LV+GGEVCMWGE  D SD++QTIWPRAAAAAERLW+  + ++    + 
Sbjct: 111 PLEGIDNASEQELVLGGEVCMWGETADTSDVQQTIWPRAAAAAERLWSRRESISLRNINE 170

Query: 242 TR--RLAHFRCLLNQ 254
           T   RL +FRCLLN+
Sbjct: 171 TALPRLQYFRCLLNR 185


>28180.m000376 beta-hexosaminidase, putative
          Length = 111

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 41/70 (58%), Gaps = 8/70 (11%)

Query: 1  GKGYPSLWPSKDCKQPLDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTS 60
          G GYP LWPS  C++PLDVS  FTF VI GIL+D          HLGGDEV+T+      
Sbjct: 20 GTGYPDLWPSSSCREPLDVSKNFTFDVISGILTDMRKIFPFELFHLGGDEVNTA------ 73

Query: 61 RIQKWLEKHG 70
            Q  L+ HG
Sbjct: 74 --QNCLDFHG 81


>29616.m000216 beta-hexosaminidase, putative
          Length = 571

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 37/250 (14%)

Query: 6   SLWPSKDCKQP----LDVSNEFTFKVIDGILSDFSXXXXXXXXHLGGDEVDTSCWSSTSR 61
           S WP +   +P    L+  N  T++V+  I++D          H GGDE+   CW +   
Sbjct: 279 SEWPDRLASEPGTGQLNPLNPKTYEVLKNIIADAVTMFPEPFYHAGGDEIIPGCWKADPA 338

Query: 62  IQKWLEKHGMNASQAYQYFVLRAQKIALSHGYEIINWE---------------------- 99
           IQ +L  +G   SQ  + FV       +S    ++ WE                      
Sbjct: 339 IQSFLSDNG-TLSQLLETFVRSTFPYIVSLNRTVVYWEDILLDDNVKVDAAILPPEHTIL 397

Query: 100 ETFNNFGNKLSRKTVVHNXADPLTDHREIHYLVCSAYNFPCRLXXXXXXXXXXXXLRCIV 159
           +T+NN  N  + K +V      +    E +YL C   +F                     
Sbjct: 398 QTWNNGPN--NTKLIVDAGYRAIVSSSEFYYLDCGHGDF-----LGNDSQYDQPPTANDT 450

Query: 160 SNQDKWYLDHLDTSWEKFYMNEPLANINDTEQQQLVIGGEVCMWGEMVDGSDIEQTIWPR 219
            N   W       +W+  Y  +    +++ E + LV+GGEV +W E  D + ++  +WPR
Sbjct: 451 GNGGSWCGSF--KTWQTIYNYDITYGLSEKEAE-LVLGGEVALWSEQADPAVLDVRLWPR 507

Query: 220 AAAAAERLWT 229
            +A AE LW+
Sbjct: 508 TSAMAETLWS 517