Jatropha Genome Database

JcCA0274511.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0274511.20 - phase: 0 
         (170 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008724 conserved hypothetical protein                          246   3e-66
29901.m000414 conserved hypothetical protein                          100   5e-22
29842.m003547 conserved hypothetical protein                           93   5e-20
29737.m001225 conserved hypothetical protein                           83   5e-17

>30128.m008724 conserved hypothetical protein
          Length = 184

 Score =  246 bits (629), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 121/168 (72%), Positives = 133/168 (79%), Gaps = 1/168 (0%)

Query: 1   MAYPPEHYGLCSNGALKIVLALVATFLIGYVVRPQLHSRESSSAQASCPCDCDCSEEFAL 60
           MAYP EHYGLCSNGAL+IVL LVATFL+GY VRP+L+SRESSS Q SCPCDC+C EEFA 
Sbjct: 1   MAYPSEHYGLCSNGALRIVLLLVATFLVGYNVRPRLYSRESSSTQVSCPCDCECPEEFAW 60

Query: 61  FLPLDCSNDDPDIHEEMEKDIVALLSEEIALQRRVANDSLEHTRALVMDARKASLHYQKE 120
           FLPLDC N DPD++EEM KDI+ALLSEEIALQRRVANDSLEHTR LVMD++ ASLHYQKE
Sbjct: 61  FLPLDCGNHDPDVYEEMRKDIIALLSEEIALQRRVANDSLEHTRTLVMDSKTASLHYQKE 120

Query: 121 AEKCNXXXXXXXXXXXXXXXXXXXXYKLTAEWEKRARELGWEEDSTRV 168
           AEKCN                    YKL+A WEKRARELGW EDS R+
Sbjct: 121 AEKCNAQTETCEEARERAEAELVEEYKLSALWEKRARELGW-EDSRRL 167


>29901.m000414 conserved hypothetical protein
          Length = 188

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 18/174 (10%)

Query: 14  GALKIVLALVATFLIGYVVRPQLH----------SRESSSAQASCPCDCDCSEEFALFLP 63
           G +K+ L L+   L GY++ P L+          S  SSS     PC CDCS +  L +P
Sbjct: 5   GVVKVGLGLMGLCLFGYLLGPPLYWHFKEALAAVSHSSSSYNTCSPCVCDCSSQPLLSIP 64

Query: 64  --------LDCSNDDPDIHEEMEKDIVALLSEEIALQRRVANDSLEHTRALVMDARKASL 115
                    DC+  DP + E+ EK+   LL+EE+ L+   A ++  H    +++A+K + 
Sbjct: 65  QGLSNASFADCAKHDPGVSEDTEKNFADLLTEELKLREAEALENQRHADMALLEAKKMTS 124

Query: 116 HYQKEAEKCNXXXXXXXXXXXXXXXXXXXXYKLTAEWEKRARELGWEEDSTRVY 169
            YQKEA+KCN                     KLTA WE RAR+ GW+E + R +
Sbjct: 125 QYQKEADKCNSGMETCEEAREKSEATLAAQKKLTALWESRARQRGWKEGAARSH 178


>29842.m003547 conserved hypothetical protein
          Length = 181

 Score = 93.2 bits (230), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 15/168 (8%)

Query: 15  ALKIVLALVATFLIGYVVRPQLHSRES-------SSAQASCPCDCDCSEEFALFLP---- 63
            LK++L L+    +GY++ P LH   S       SS+     C CDCS    L LP    
Sbjct: 9   GLKVILWLMGICTVGYILGPPLHWHLSDTLAVTLSSSSYCATCHCDCSSLPLLSLPRGLN 68

Query: 64  ----LDCSNDDPDIHEEMEKDIVALLSEEIALQRRVANDSLEHTRALVMDARKASLHYQK 119
                DC  +DP++ EEMEK    LLSEE+ L+   A    +     +++A+K +  YQK
Sbjct: 69  NNSFTDCMKNDPEVSEEMEKSFKGLLSEEVGLKEAEALRDQQRADVALLEAKKMASQYQK 128

Query: 120 EAEKCNXXXXXXXXXXXXXXXXXXXXYKLTAEWEKRARELGWEEDSTR 167
           +A+KCN                     +L+A WE RAR+ GW+E   R
Sbjct: 129 DADKCNAGMGTCEEARESAESTLEAHLRLSAMWELRARQRGWKESMAR 176


>29737.m001225 conserved hypothetical protein
          Length = 172

 Score = 83.2 bits (204), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 54/98 (55%)

Query: 65  DCSNDDPDIHEEMEKDIVALLSEEIALQRRVANDSLEHTRALVMDARKASLHYQKEAEKC 124
           DC N+DPD+  EMEK  V LL+EE+ LQ  VA + + H      +A++ +  YQ+EAEKC
Sbjct: 73  DCGNNDPDLKREMEKQFVDLLTEELKLQEAVAEEHIHHMNITFAEAKRVASQYQREAEKC 132

Query: 125 NXXXXXXXXXXXXXXXXXXXXYKLTAEWEKRARELGWE 162
           N                     K+T  WE+RAR+LGWE
Sbjct: 133 NAATETCEEARERAEVLLIKERKVTFLWERRARQLGWE 170