Jatropha Genome Database
- JcCA0273631.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0273631.30 - phase: 1 /partial
(66 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014220 nucleic acid binding protein, putative 106 2e-24
30078.m002347 nucleic acid binding protein, putative 106 2e-24
29646.m001073 nucleic acid binding protein, putative 106 3e-24
28694.m000662 nucleic acid binding protein, putative 106 3e-24
29780.m001361 zinc finger protein, putative 104 1e-23
29794.m003304 nucleic acid binding protein, putative 103 1e-23
29883.m001956 nucleic acid binding protein, putative 103 2e-23
29643.m000323 nucleic acid binding protein, putative 103 2e-23
29780.m001362 nucleic acid binding protein, putative 102 4e-23
29647.m001996 nucleic acid binding protein, putative 101 8e-23
30128.m008805 nucleic acid binding protein, putative 100 1e-22
30128.m008580 nucleic acid binding protein, putative 100 2e-22
28952.m000016 nucleic acid binding protein, putative 91 1e-19
29780.m001390 nucleic acid binding protein, putative 90 3e-19
29983.m003121 nucleic acid binding protein, putative 76 4e-15
29728.m000841 hypothetical protein 46 4e-06
>30170.m014220 nucleic acid binding protein, putative
Length = 502
Score = 106 bits (265), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/48 (95%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 49 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 96
>30078.m002347 nucleic acid binding protein, putative
Length = 525
Score = 106 bits (264), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 51 DPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKL 98
>29646.m001073 nucleic acid binding protein, putative
Length = 520
Score = 106 bits (264), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/48 (95%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 42 DPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 89
>28694.m000662 nucleic acid binding protein, putative
Length = 552
Score = 106 bits (264), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 47/48 (97%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 68 DPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 115
>29780.m001361 zinc finger protein, putative
Length = 571
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 49/55 (89%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLLDSLIYE 55
DPDAEV+ALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL E
Sbjct: 61 DPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKE 115
>29794.m003304 nucleic acid binding protein, putative
Length = 446
Score = 103 bits (258), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTLMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 6 DPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKL 53
>29883.m001956 nucleic acid binding protein, putative
Length = 466
Score = 103 bits (257), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 46/48 (95%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPKTL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 59 DPDAEVVALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 106
>29643.m000323 nucleic acid binding protein, putative
Length = 543
Score = 103 bits (256), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/48 (93%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSPK+LMATNRF+CEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 45 DPDAEVVALSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKL 92
>29780.m001362 nucleic acid binding protein, putative
Length = 589
Score = 102 bits (254), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 49/55 (89%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLLDSLIYE 55
+PDAEV+ALSPKTLMATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL E
Sbjct: 53 NPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKE 107
>29647.m001996 nucleic acid binding protein, putative
Length = 631
Score = 101 bits (251), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/55 (81%), Positives = 48/55 (87%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLLDSLIYE 55
DP+A+V+ALSP TLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL E
Sbjct: 95 DPNADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRTTTE 149
>30128.m008805 nucleic acid binding protein, putative
Length = 513
Score = 100 bits (250), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/48 (91%), Positives = 47/48 (97%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DP+AEV+ALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL
Sbjct: 79 DPNAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 126
>30128.m008580 nucleic acid binding protein, putative
Length = 453
Score = 100 bits (248), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 42/48 (87%), Positives = 48/48 (100%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
DPDAEV+ALSP+TLMATNR++CE+C+KGFQRDQNLQLHRRGHNLPWKL
Sbjct: 34 DPDAEVVALSPRTLMATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKL 81
>28952.m000016 nucleic acid binding protein, putative
Length = 442
Score = 90.5 bits (223), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 46/49 (93%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLL 49
DPDAEV++LSPKTL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKLL
Sbjct: 37 DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL 85
>29780.m001390 nucleic acid binding protein, putative
Length = 477
Score = 89.7 bits (221), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 46/49 (93%)
Query: 1 DPDAEVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLL 49
DPDAEV++LSP+TL+ ++R+VCEICN+GFQRDQNLQ+HRR H +PWKLL
Sbjct: 51 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL 99
>29983.m003121 nucleic acid binding protein, putative
Length = 437
Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/34 (94%), Positives = 33/34 (97%)
Query: 15 MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 48
MATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL
Sbjct: 1 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKL 34
>29728.m000841 hypothetical protein
Length = 357
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 5 EVMALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 47
E++ L + ++A + C IC KGF+RD NL++H RGH +K
Sbjct: 257 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYK 299