Jatropha Genome Database

JcCA0272091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0272091.10 + phase: 0 /partial
         (423 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29686.m000873 conserved hypothetical protein                          631   0.0  
29785.m000941 conserved hypothetical protein                          453   e-128

>29686.m000873 conserved hypothetical protein
          Length = 626

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/402 (78%), Positives = 357/402 (88%), Gaps = 9/402 (2%)

Query: 22  EQKASDKSSGSTNTASGTPASAYNPISGTFHTLEIPSATSSPHFHDNGRFRNIDDTDEHS 81
           +QKAS KSSGSTNT SG+PASAYNP+SGTFHTLEIPSA SSP FHDNGRFRNIDDTDEHS
Sbjct: 22  QQKASSKSSGSTNTVSGSPASAYNPLSGTFHTLEIPSAASSPPFHDNGRFRNIDDTDEHS 81

Query: 82  SSPHGTVSEYDSVSNNGSCSGESEDPKDKTTSSTRQETVPGLENDRREKIRLKNEKKHQR 141
           SSPHGTVSEYDSVSNNGSCSGESEDPK+K     RQ+TVPGL+NDRREKIRLKNEKKHQR
Sbjct: 82  SSPHGTVSEYDSVSNNGSCSGESEDPKEKIF---RQDTVPGLDNDRREKIRLKNEKKHQR 138

Query: 142 QKERRAQELHERCSGYLMSRKLEALSEQLVAMGFSHERATLALVLNEGRVEESVNWLFEG 201
           Q+ERRAQELHERCSG+LMSRKLE+LS+QLVAMGFSHERATLALVLNEGRVE+SVNWLFEG
Sbjct: 139 QRERRAQELHERCSGFLMSRKLESLSQQLVAMGFSHERATLALVLNEGRVEQSVNWLFEG 198

Query: 202 NEEEARNKDSKLGTSSNLKIDISEELAQISVLEVRYKCSKQEVERAIVACEGDLLKAEEI 261
           NEEEARNKD+K G+S NLKIDIS+ELAQ+S LEVRYKCS+QEVERA+VACEGDLLKAEEI
Sbjct: 199 NEEEARNKDTKRGSSGNLKIDISDELAQLSTLEVRYKCSRQEVERAVVACEGDLLKAEEI 258

Query: 262 LQAQKLEQPATPLTSEEVTDANDLKRTHEKPLSS-SITIQQRRNEQDFNYAKTSIALPMY 320
           +QAQK E PATP   EE  DAN++KR  EKP+SS S+TIQQ+RN++DFNY+K +I++  Y
Sbjct: 259 IQAQKQEPPATP-PQEETVDANNMKRPQEKPMSSASVTIQQKRNDRDFNYSKAAISVSTY 317

Query: 321 SEPGNRSLQPLNQSRSLADKRWTATGTSPSFSLGMASPGQVTPQSAKLEVRLGVSGNEGK 380
           SEPG+R+LQ +NQ +SLA++RWTA G+S SFS  M  P QV   + KLEV  GVSGNEGK
Sbjct: 318 SEPGSRNLQSINQPKSLAERRWTA-GSSSSFSSSMVPPMQVQLPAGKLEV--GVSGNEGK 374

Query: 381 NHQHILREPIVMMQRRQSINAKQNQVPSISASPSVTAGWYSN 422
           NHQ ILREP+V+MQR QSINAKQN+VPSI+  P VTAGWYSN
Sbjct: 375 NHQQILREPVVVMQRPQSINAKQNEVPSITY-PVVTAGWYSN 415


>29785.m000941 conserved hypothetical protein
          Length = 663

 Score =  453 bits (1165), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 240/432 (55%), Positives = 300/432 (69%), Gaps = 33/432 (7%)

Query: 23  QKASDKSSGSTNTASGTPASAYNPISGTFHTLEIPSATSSPHFHDNGRFRNIDDTDEHSS 82
           QKAS KSSG++N  SG PASAYNP+SGTFH LE   A+S+   H NGRFRN+D+TD+H  
Sbjct: 19  QKASLKSSGTSNAGSGIPASAYNPLSGTFHALETVPASSTSSLHSNGRFRNMDETDDHFG 78

Query: 83  SPHGTVSEYDSVSNNGSCSGESEDPKDKTTS-STRQETVPGLENDRREKIRLKNEKKHQR 141
           S HG   EYDS+SNNGS SGESED K KT++   +QET+PG +ND+REKIR KNEKKHQR
Sbjct: 79  SAHGAGVEYDSLSNNGSWSGESEDHKKKTSNLPNQQETIPGADNDKREKIRQKNEKKHQR 138

Query: 142 QKERRAQELHERCSGYLMSRKLEALSEQLVAMGFSHERATLALVLNEGRVEESVNWLFEG 201
           QKERRAQELHERCSGYLMSRKLEAL++QLVAMGFSHERAT+AL+LNEG+VEESV+WLFEG
Sbjct: 139 QKERRAQELHERCSGYLMSRKLEALAQQLVAMGFSHERATMALILNEGKVEESVSWLFEG 198

Query: 202 NEEEARNKDSKLGTSSNLKIDISEELAQISVLEVRYKCSKQEVERAIVACEGDLLKAEEI 261
            E+  + +   LG   NLKIDIS+ELA I+ +EVRYKC+KQEVERA++  EGDL KA E 
Sbjct: 199 GEDADKLQGQNLG-GGNLKIDISDELALIADMEVRYKCTKQEVERAVITSEGDLEKAAES 257

Query: 262 LQAQKLEQPATPLTSEEVTDANDLKRTHEKPLSSSIT----------------IQQRRNE 305
           L+  KLE P  P   EE  D     +     L+ S+                 +QQRR++
Sbjct: 258 LRELKLEPPTAPPKPEETGDPPTASK-FSVALNQSVARRQQQQQQQKSNPPSMVQQRRDD 316

Query: 306 QDFNYAKTSIALPMYSEPGNRSLQPLN------------QSRSLADKRWTATGTSPSFSL 353
           +DFNY KT++ +   SE G+++LQP+             Q+   +DKRW + G+SP  S 
Sbjct: 317 KDFNYTKTAVPVVGSSESGSKNLQPMKRIQPKLEWAKPQQTAVPSDKRWPSAGSSPPVSY 376

Query: 354 GMASPGQVTPQSAKLEVRLGVSGNEGKN-HQHILREPIVMMQRRQSINAKQNQVPSISAS 412
            +ASP QV+P  AK+E R   +G+E K+ H  I+REP++MMQR QS+N KQ    SIS+S
Sbjct: 377 SLASPLQVSPPPAKIETRYVAAGSEYKDSHAAIVREPVIMMQRPQSVNVKQVPATSISSS 436

Query: 413 PSVTAG-WYSNN 423
           P  TA  WY  N
Sbjct: 437 PPGTAASWYPTN 448