Jatropha Genome Database

JcCA0271581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0271581.10 + phase: 0 /partial
         (250 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        471   e-133
29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        274   2e-74
30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        247   4e-66
29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        225   1e-59
29610.m000411 Coronatine-insensitive protein, putative                 87   8e-18

>29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 589

 Score =  471 bits (1213), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 225/248 (90%), Positives = 239/248 (96%)

Query: 3   NLTELDIQENGIDDKSGSWLSCFPENFSSLEILNFANLNSEVNFDALERLVTRCKSLKVL 62
           NLTELDIQENGIDDKSGSWL+CFP NF+SLE+LNFANLNSEVNFDALERLV+R KSLKVL
Sbjct: 172 NLTELDIQENGIDDKSGSWLNCFPGNFTSLEVLNFANLNSEVNFDALERLVSRSKSLKVL 231

Query: 63  KVNKNISLDQLQRLLVGAPQLTELGTGSFSQELSTQQYTDLENAFSHCKNLDTLSGLWEA 122
           KVNKNISL+QLQRLL   PQLTELGTGSFSQEL+ +Q+T++EN FSHCKNLDTLSGLWEA
Sbjct: 232 KVNKNISLEQLQRLLACTPQLTELGTGSFSQELTARQFTEVENTFSHCKNLDTLSGLWEA 291

Query: 123 MALYLPVLYPACTNLTFLNLSYAALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEAVGSH 182
           MA YLPVLYPACTNLTFLNLSYAALQSLEL NLLRHCPQLRRLWVLDT+EDKGLE+VGS+
Sbjct: 292 MAPYLPVLYPACTNLTFLNLSYAALQSLELANLLRHCPQLRRLWVLDTIEDKGLESVGSN 351

Query: 183 CPLLEELRVFPADPFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNC 242
           CPLLEELRVFPADPF+EEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNC
Sbjct: 352 CPLLEELRVFPADPFEEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNC 411

Query: 243 PNFTHFRL 250
           PNFTHFRL
Sbjct: 412 PNFTHFRL 419


>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 585

 Score =  274 bits (701), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 135/248 (54%), Positives = 174/248 (70%)

Query: 3   NLTELDIQENGIDDKSGSWLSCFPENFSSLEILNFANLNSEVNFDALERLVTRCKSLKVL 62
           NL ELD++E+ +DD SG WLS FP++F+SL  LN + L SEV+F AL+RLV RC +L+ L
Sbjct: 157 NLRELDLRESEVDDPSGHWLSHFPDSFTSLVSLNISCLGSEVSFSALKRLVGRCPNLRTL 216

Query: 63  KVNKNISLDQLQRLLVGAPQLTELGTGSFSQELSTQQYTDLENAFSHCKNLDTLSGLWEA 122
           ++N+ + LD+L  +L  APQL ELGTG++S EL    ++ L  AFS CK L +LSG W+ 
Sbjct: 217 RLNRAVPLDRLANILRRAPQLVELGTGAYSAELRPDVFSTLSGAFSGCKELKSLSGFWDV 276

Query: 123 MALYLPVLYPACTNLTFLNLSYAALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEAVGSH 182
           +  YLP +YP C+ LT LNLSYA +QS +L  L+  C  L+RLWVLD +ED GLEA+ + 
Sbjct: 277 VPGYLPAIYPICSGLTSLNLSYATIQSPDLVKLVSQCQSLQRLWVLDYIEDVGLEALATF 336

Query: 183 CPLLEELRVFPADPFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNC 242
           C  L ELRVFP+DPF  E    +TE G V VS GC +L  VLYFCRQMTN A+ TI +N 
Sbjct: 337 CKDLRELRVFPSDPFGPEPNVSLTEQGLVVVSEGCPKLQSVLYFCRQMTNDALITIARNR 396

Query: 243 PNFTHFRL 250
           PN T FRL
Sbjct: 397 PNMTRFRL 404


>30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 571

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 122/248 (49%), Positives = 167/248 (67%), Gaps = 3/248 (1%)

Query: 4   LTELDIQENGIDDKSGSWLSCFPENFSSLEILNFANLNSEVNFDALERLVTRCKSLKVLK 63
           + ELD+QEN ++D  G WLSCFP++ + L  LNFA L  ++N   LERLV R  +L+ L+
Sbjct: 153 IRELDLQENEVEDHRGHWLSCFPDSSTCLTSLNFACLKGDINLGVLERLVARSPNLRSLR 212

Query: 64  VNKNISLDQLQRLLVGAPQLTELGTGSFSQELSTQQYTDLENAFSHCKNLDTLSGLWEAM 123
           +N+ + LD LQ++L+ APQL +LG GS+  +  ++ Y+ L  A   CK++ +LSG  +  
Sbjct: 213 LNRAVPLDTLQKILMQAPQLVDLGVGSYVHDPDSETYSKLVAAVQKCKSVRSLSGFLDVA 272

Query: 124 ALYLPVLYPACTNLTFLNLSYA-ALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEAVGSH 182
              LP  +  C NLT LNLSYA  +Q  EL  L+RHC +L+RLW+LD + DKGLE V S 
Sbjct: 273 PHCLPAFHLMCPNLTSLNLSYAPGIQGSELTKLIRHCRKLQRLWILDCIGDKGLEVVAST 332

Query: 183 CPLLEELRVFPADPFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNC 242
           C  L+ELRVFP+D +       VTE G VA+S GC +L  +LYFC+QMTNAA+ T+ +NC
Sbjct: 333 CKDLQELRVFPSDLYVGNA--AVTEEGLVAISSGCPKLDSILYFCQQMTNAALITVAKNC 390

Query: 243 PNFTHFRL 250
           PNFT FRL
Sbjct: 391 PNFTRFRL 398


>29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 635

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/252 (47%), Positives = 164/252 (65%), Gaps = 5/252 (1%)

Query: 3   NLTELDIQENGIDDKSGSWLSCFPENFSSLEILNFANLNSEVNFDALERLVTRCKSLKVL 62
            L  LD+ E+ + D    W+SCFPE+   LE L F  +   +NFDALERLV R  SLK +
Sbjct: 216 QLRVLDLIESEVADDEVDWISCFPESEMCLESLIFDCVECSINFDALERLVARSPSLKKI 275

Query: 63  KVNKNISLDQLQRLLVGAPQLTELGTGSF--SQELSTQ--QYTDLENAFSHCKNLDTLSG 118
           ++N+ +S+ QL RL++ APQLT LGTGSF  S + + Q  Q  D  +AF+ CK+L  LSG
Sbjct: 276 RLNRYVSVSQLYRLMIRAPQLTHLGTGSFRPSDDAAAQGEQEPDYASAFAACKSLVCLSG 335

Query: 119 LWEAMALYLPVLYPACTNLTFLNLSYAALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEA 178
             E ++ YLP +YP C NL  LNLSYA + + +L  ++ +C +L+  WVLD++ D+GL+A
Sbjct: 336 FKEILSDYLPAIYPVCANLNSLNLSYANITADQLKPIISNCHKLQTFWVLDSICDEGLQA 395

Query: 179 VGSHCPLLEELRVFPADPFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATI 238
           V + C  L ELRVFP D   E+    V+E G  A+S GCR+L  +LYFC+ MTNAAV  +
Sbjct: 396 VAATCKELRELRVFPIDA-REDSEGPVSEVGLQAISEGCRKLQSILYFCQHMTNAAVIAM 454

Query: 239 VQNCPNFTHFRL 250
            +NCP+   FRL
Sbjct: 455 SKNCPDLVVFRL 466


>29610.m000411 Coronatine-insensitive protein, putative
          Length = 602

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 124/254 (48%), Gaps = 13/254 (5%)

Query: 3   NLTELDIQENGIDDKSGSWLSCFPENFSSLEILNF--ANLNSEVNFDALERLVTRCKSLK 60
            L  L ++E+ I +K G WL     N + LEILNF   +LN+ V F+ LE +   C+ L 
Sbjct: 172 QLRTLFLEESAIFEKDGDWLHEIAMNNTVLEILNFYMTDLNA-VRFEDLEIIAKNCRCLV 230

Query: 61  VLKVNKNISLDQLQRLLVGAPQLTELGTGSFSQELSTQQYTDLENAFSHCKNLDTLSGLW 120
            +K++    LD L      A  L E   GSF+   S     D  +A +  + L  L GL 
Sbjct: 231 SVKISDCEILD-LAGFFHAAAALEEFCGGSFN--YSANDLQDKYSAVTFPRKLCRL-GLT 286

Query: 121 EAMALYLPVLYPACTNLTFLNLSYAALQSLELDNLLRHCPQLRRLWVLDTVEDKGLEAVG 180
                 +P+++P  + L  L+L YA L + +   L++    L  L   + + D+GLE + 
Sbjct: 287 YLGKNEMPIVFPFASLLKKLDLLYALLDTEDHCLLIQKFCNLEVLETRNVIGDRGLEVLA 346

Query: 181 SHCPLLEELRV-FPADPF---DEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVA 236
           S C  L+ LR+   AD     DEE I  V+  G +A++ GC  L Y+  +   +TNAA+ 
Sbjct: 347 SSCKRLKRLRIERGADEQGMEDEEGI--VSHRGLIALAQGCLELEYLAVYVSDITNAALE 404

Query: 237 TIVQNCPNFTHFRL 250
            I  +  N   FRL
Sbjct: 405 HIGAHLKNLNDFRL 418