Jatropha Genome Database

JcCA0270781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270781.10 - phase: 1 /partial
         (478 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29637.m000726 aromatic amino acid decarboxylase, putative             612   e-175
29950.m001181 aromatic amino acid decarboxylase, putative             529   e-150
28725.m000309 aromatic amino acid decarboxylase, putative             407   e-114
60499.m000013 aromatic amino acid decarboxylase, putative             317   7e-87
27544.m000014 aromatic amino acid decarboxylase, putative             218   4e-57
29439.m000226 hypothetical protein                                     89   5e-18

>29637.m000726 aromatic amino acid decarboxylase, putative
          Length = 492

 Score =  612 bits (1578), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 286/479 (59%), Positives = 368/479 (76%), Gaps = 14/479 (2%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIADYY+ IE  PVLSQVEPGYLRK LP SAP+ PE+++ +L DVQ  ILPG+THWQSP
Sbjct: 24  DFIADYYKTIENFPVLSQVEPGYLRKLLPDSAPNQPESLQNVLDDVQAKILPGVTHWQSP 83

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           NYFAY+ ++ S A FLGEML  G N+VGF+W++SPAATELE IV+DWLG++L+LP  FL 
Sbjct: 84  NYFAYYPSNSSVAGFLGEMLSAGINMVGFSWITSPAATELEMIVLDWLGKMLKLPEEFLS 143

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
           +G GGGVIQGT  EA+L  L+AARD++LR +GK+ + KLVVY SDQTHSALQKA QI GI
Sbjct: 144 TGQGGGVIQGTASEAVLVALVAARDKVLRRVGKDALRKLVVYGSDQTHSALQKACQIGGI 203

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPLCD 240
           +P N R ++T  ST +AL+PD L   I  DI  GLIP FLCAT+GTTS+TAVDPL  L  
Sbjct: 204 HPVNCRLLETDSSTNYALAPDLLSRAISEDISLGLIPFFLCATVGTTSSTAVDPLLALGK 263

Query: 241 VAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVKDP 300
           +A+   +W HVDAAYAG+AC+CPE++ ++DG+E+A+SF++NAHKW LTN DC  LWVKD 
Sbjct: 264 IAKSNGMWFHVDAAYAGSACVCPEYRCYMDGVEEADSFNMNAHKWFLTNFDCSALWVKDR 323

Query: 301 NALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTFLR 360
           NALI+SLST+PE+L+NK S +  V+DYKDWQI L RRFRSLKLW+VLR YGV  L+ ++R
Sbjct: 324 NALIQSLSTSPEFLQNKPSQTNTVVDYKDWQIPLGRRFRSLKLWMVLRLYGVEKLQCYIR 383

Query: 361 QHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREI-LANEL 419
            H+ +AK FEGL+ ED RFE+V P  FA+VCFR++P             PD  +   N+L
Sbjct: 384 NHINLAKYFEGLIAEDTRFEVVSPPIFALVCFRLLP-------------PDNNVDHGNKL 430

Query: 420 NRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAILRTS 478
           +  LL+++N++G IF++H ++ G Y +RFAVGA LTE+ HV  AWKV+++ A A+L TS
Sbjct: 431 SHDLLDAVNSTGKIFISHTVLSGKYILRFAVGAPLTEERHVTAAWKVLQDEACALLETS 489


>29950.m001181 aromatic amino acid decarboxylase, putative
          Length = 445

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 247/417 (59%), Positives = 328/417 (78%), Gaps = 13/417 (3%)

Query: 59  SPNYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCF 118
           SPN+FAYF A+ S A FLGEMLC+G N+VGFNW+SSPAATELES+V+DW+G +++LPS F
Sbjct: 40  SPNFFAYFQANASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSSF 99

Query: 119 LFSGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIA 178
           LFSG+GGGV+ G+TCEAI+CTL+AARD+ L+ +G +KI KLVVYASDQTH+ LQK  +I 
Sbjct: 100 LFSGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRIV 159

Query: 179 GINPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLRPL 238
           GI   N R++ T+ S+ F+LS  +L+  I++DI+ GL+P+FLCAT+GTT+  AVDP+  L
Sbjct: 160 GIPFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIEEL 219

Query: 239 CDVAREYNIWVHVDAAYAGNACICPEFQHFLDGLEDANSFSLNAHKWLLTNLDCCCLWVK 298
             +A +Y++W H+DAAYAG+ACICPEF+++L+G+E A+S S+N HKW LTN+DCCCLWVK
Sbjct: 220 GKIATKYDLWFHIDAAYAGSACICPEFRNYLNGVELADSISMNPHKWFLTNMDCCCLWVK 279

Query: 299 DPNALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRSYGVGNLRTF 358
            P+ L+ SLST PEYL+N AS+S+ VIDYKDWQIALSRRFR++KLW+V+R +G+  L   
Sbjct: 280 QPDFLVDSLSTKPEYLRNTASESSAVIDYKDWQIALSRRFRAIKLWVVIRRHGLATLMHH 339

Query: 359 LRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQILPDREILANE 418
           +R  V MAK FE LV  DKRFEIVVPR FA+VCFR+ P      K G          ++E
Sbjct: 340 IRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKP------KDGANS-------SDE 386

Query: 419 LNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVREHANAIL 475
           LNRRLL  +N SGC F+THG+ GG+YF+R A+G+TLTE+ HV   WK+++E A+++L
Sbjct: 387 LNRRLLAMVNQSGCAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQEKAHSML 443


>28725.m000309 aromatic amino acid decarboxylase, putative
          Length = 316

 Score =  407 bits (1045), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 182/324 (56%), Positives = 243/324 (75%), Gaps = 10/324 (3%)

Query: 155 KIGKLVVYASDQTHSALQKAAQIAGINPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKG 214
           K+  LVVYASDQTHS   KA ++AG+NP N R + T+  T F+LSP +LR  IQ D+  G
Sbjct: 3   KLTALVVYASDQTHSTFSKACKLAGLNPSNIRLLPTSLDTAFSLSPSTLRKAIQDDVASG 62

Query: 215 LIPLFLCATIGTTSTTAVDPLRPLCDVAREYNIWVHVDAAYAGNACICPEFQHFLDGLED 274
           L+PL+LC T+GTTSTTA+DP+  L DVA EY++W+H+DAAY G+ACICPEF+ +LDG+E 
Sbjct: 63  LVPLYLCVTVGTTSTTAIDPVGQLADVANEYDMWIHIDAAYGGSACICPEFRGYLDGVER 122

Query: 275 ANSFSLNAHKWLLTNLDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVIDYKDWQIAL 334
            +S SL+ HKWLL+ LDCCCLWVK PN L+++LSTNPEYLKNK S+S  V+D+KDWQ+  
Sbjct: 123 VDSLSLSPHKWLLSYLDCCCLWVKSPNLLVQALSTNPEYLKNKQSESDSVVDFKDWQVGT 182

Query: 335 SRRFRSLKLWLVLRSYGVGNLRTFLRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRI 394
            RRF+SL+LWL+LRSYGV NL+  +R  V+MAK+FEG V+ D RFEI+ PR FA+VCFR+
Sbjct: 183 GRRFKSLRLWLILRSYGVSNLQGHIRSDVQMAKIFEGFVKSDPRFEIMTPRTFALVCFRL 242

Query: 395 VPGAIEMGKGGVQILPDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATL 454
            P     G    ++          +N +LLE +N+SG I+MTH  VGG Y +RFAVG TL
Sbjct: 243 KPTHKLDGSKHTEM----------MNGKLLEWVNSSGRIYMTHTKVGGEYLLRFAVGTTL 292

Query: 455 TEDHHVIMAWKVVREHANAILRTS 478
           TE+ HV+ AWK+++E A+ +L+++
Sbjct: 293 TEERHVVSAWKLIKEGADVLLKSA 316


>60499.m000013 aromatic amino acid decarboxylase, putative
          Length = 239

 Score =  317 bits (813), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 147/236 (62%), Positives = 195/236 (82%)

Query: 1   DFIADYYQNIEKHPVLSQVEPGYLRKRLPLSAPHNPETIETILQDVQKHILPGITHWQSP 60
           DFIA+YY+NIEK+PV SQV+PGYL  +LP SAP+ PE+IE IL+D+   I+PG+THWQSP
Sbjct: 4   DFIAEYYKNIEKYPVQSQVQPGYLSTKLPKSAPYCPESIEDILKDISDSIIPGLTHWQSP 63

Query: 61  NYFAYFAASGSTASFLGEMLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLF 120
           N+FAYF  + S A FLGEMLC+G N+VGFNW+SSPAATELES+V+DW+G +++LPS FLF
Sbjct: 64  NFFAYFQINASNAGFLGEMLCSGLNVVGFNWISSPAATELESLVVDWMGNLMKLPSSFLF 123

Query: 121 SGSGGGVIQGTTCEAILCTLIAARDQMLRGIGKEKIGKLVVYASDQTHSALQKAAQIAGI 180
           SG+GGGV+ G+TCEAI+CTL+AARD+ L+ +G +KI KLVVYASDQTH+ LQK  +I GI
Sbjct: 124 SGNGGGVLHGSTCEAIICTLVAARDRALKRLGWDKITKLVVYASDQTHATLQKGTRIVGI 183

Query: 181 NPENFRAIKTTKSTLFALSPDSLRVTIQSDIEKGLIPLFLCATIGTTSTTAVDPLR 236
              N R++ T+ S+ F+LS  +L+  I++DI+ GL+P+FLCAT+GTT+  AVDP+ 
Sbjct: 184 PFSNIRSLPTSYSSGFSLSSRTLQEAIENDIKSGLVPIFLCATVGTTTCGAVDPIE 239


>27544.m000014 aromatic amino acid decarboxylase, putative
          Length = 174

 Score =  218 bits (556), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 104/186 (55%), Positives = 135/186 (72%), Gaps = 13/186 (6%)

Query: 290 LDCCCLWVKDPNALIKSLSTNPEYLKNKASDSAQVIDYKDWQIALSRRFRSLKLWLVLRS 349
           +DCCCLWVK P++L+ SLS  PEYL+N AS+S  VIDYKDWQIALSRRFR++KLW+V+R 
Sbjct: 1   MDCCCLWVKQPDSLVDSLSIEPEYLRNTASESGAVIDYKDWQIALSRRFRAIKLWVVIRR 60

Query: 350 YGVGNLRTFLRQHVEMAKVFEGLVREDKRFEIVVPRNFAMVCFRIVPGAIEMGKGGVQIL 409
           +G+  L   +R  V MAK FE LV  DKRFEIVVPR FA+VCFR+ P      K G    
Sbjct: 61  HGLATLMHHIRSDVNMAKRFESLVANDKRFEIVVPRKFALVCFRLKP------KDGANS- 113

Query: 410 PDREILANELNRRLLESINASGCIFMTHGMVGGVYFMRFAVGATLTEDHHVIMAWKVVRE 469
                 ++ELNRRLL  +N SG  F+THG+ GG+YF+R A+G+TLTE+ HV   WK+++E
Sbjct: 114 ------SDELNRRLLAMVNQSGRAFLTHGVAGGIYFIRCAIGSTLTEERHVDDLWKLIQE 167

Query: 470 HANAIL 475
            A+++L
Sbjct: 168 KAHSML 173


>29439.m000226 hypothetical protein
          Length = 58

 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 39/58 (67%), Positives = 50/58 (86%)

Query: 79  MLCTGFNIVGFNWLSSPAATELESIVMDWLGQVLQLPSCFLFSGSGGGVIQGTTCEAI 136
           ML  G NIVGFNW+SSPAATELES +++W+  +L+LPS FLFSG+GGGV+ G+TC+AI
Sbjct: 1   MLSLGLNIVGFNWISSPAATELESPIVNWMANLLKLPSSFLFSGNGGGVLHGSTCKAI 58