Jatropha Genome Database

JcCA0270701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0270701.10 + phase: 2 /pseudo/partial
         (205 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29651.m000291 succinate dehydrogenase, putative                       315   7e-87
29822.m003326 l-aspartate oxidase, putative                            89   1e-18
34898.m000025 l-aspartate oxidase, putative                            72   2e-13

>29651.m000291 succinate dehydrogenase, putative
          Length = 622

 Score =  315 bits (808), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 151/153 (98%), Positives = 152/153 (99%)

Query: 51  MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 110
           MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET
Sbjct: 304 MERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISET 363

Query: 111 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAACAS 170
           AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPD+VVPGLMAAGEAACAS
Sbjct: 364 AAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDSVVPGLMAAGEAACAS 423

Query: 171 VHGANRLGANSLLDIVVFGRACANRVAEINRPG 203
           VHGANRLGANSLLDIVVFGRACANRVAEI RPG
Sbjct: 424 VHGANRLGANSLLDIVVFGRACANRVAEIQRPG 456


>29822.m003326 l-aspartate oxidase, putative
          Length = 655

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 19/143 (13%)

Query: 51  MERYAP---TAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGI 107
           MER+ P      +LA RDVV+RS+  ++++       + ++ L ++H P + +    P I
Sbjct: 358 MERFMPLYDERAELAPRDVVARSIDDQLKKRN-----EKYVLLDISHKPREKILSHFPNI 412

Query: 108 SETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLMAAGEAA 167
           +     + G+D+T +PIPV+P  HY  GG+     GE            V GL  AGE A
Sbjct: 413 AAECLKY-GLDITLQPIPVVPAAHYMCGGVRAGLQGETN----------VRGLYVAGEVA 461

Query: 168 CASVHGANRLGANSLLDIVVFGR 190
           C  +HGANRL +NSLL+ +VF R
Sbjct: 462 CTGLHGANRLASNSLLEALVFAR 484


>34898.m000025 l-aspartate oxidase, putative
          Length = 224

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 54/96 (56%), Gaps = 11/96 (11%)

Query: 102 ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTVKGNDPDAVVPGLM 161
            R P I+E     AGV+   +PIPV P VHY+MGG+ T+  G           + VPGL 
Sbjct: 21  SRFPVIAELCQ-EAGVNPGLQPIPVRPAVHYHMGGVATDLDGR----------SSVPGLW 69

Query: 162 AAGEAACASVHGANRLGANSLLDIVVFGRACANRVA 197
            AGEAA   +HGANRL +NSLL+  V G   A  +A
Sbjct: 70  VAGEAASTGLHGANRLASNSLLEAAVMGMRAARSIA 105