Jatropha Genome Database

JcCA0269951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269951.10 + phase: 0 /partial
         (50 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30162.m001300 pantothenate kinase, putative                            62   5e-11
30147.m013941 Pantothenate kinase, putative                            58   9e-10

>30162.m001300 pantothenate kinase, putative
          Length = 367

 Score = 62.4 bits (150), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/30 (96%), Positives = 29/30 (96%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQV 30
           AVIFVDNSGADIILGILPFARELLR GTQV
Sbjct: 215 AVIFVDNSGADIILGILPFARELLRHGTQV 244


>30147.m013941 Pantothenate kinase, putative
          Length = 907

 Score = 58.2 bits (139), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/34 (70%), Positives = 31/34 (91%)

Query: 1   AVIFVDNSGADIILGILPFARELLRRGTQVCFIS 34
           A++FVDNSGAD++LG+LP ARELLRRGT+V  I+
Sbjct: 733 ALLFVDNSGADVVLGMLPLARELLRRGTEVVLIA 766