Jatropha Genome Database

JcCA0269921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0269921.10 - phase: 2 /pseudo/partial
         (376 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticul...   483   e-137
28176.m000273 Omega-3 fatty acid desaturase, chloroplast precurs...   437   e-123
29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor    436   e-122
28035.m000362 oleate 12-hydroxylase                                   150   1e-36
29613.m000358 omega-6 desaturase, endoplasmic reticulum               147   6e-36
29696.m000105 Omega-6 fatty acid desaturase, chloroplast precurs...    51   1e-06

>29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticulum,
           putative
          Length = 506

 Score =  483 bits (1244), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 219/263 (83%), Positives = 246/263 (93%)

Query: 107 NNIVGHFLHSSILVPYHGWRISHRTHHQYHGNVEKDESWVPLPEKIYKELDLSTRIMRFT 166
           NN+VGH LHSSILVPYHGWRISHRTHHQ HGNV+KDESWVPLPEKIY  LD+STRIMRFT
Sbjct: 167 NNVVGHLLHSSILVPYHGWRISHRTHHQNHGNVDKDESWVPLPEKIYNSLDVSTRIMRFT 226

Query: 167 IPLPMLAYPFYLWSRSPGKEGSHFNPYSNLFAPHERKAVLTSTLCWSVMALLLFCSCFIF 226
           +PLP+LAYP YLW+R PGK+GSHF+PYS+LFAP+ER+AVLTST+CW +M LLL  SCF+F
Sbjct: 227 VPLPLLAYPIYLWTRGPGKDGSHFSPYSDLFAPNERRAVLTSTVCWILMILLLLYSCFVF 286

Query: 227 GPVQVLKFYGIPYWIFVMWLDFVTYLHHHGHDQKLPWYRGKEWSYLRGGLTTVDRDYGFF 286
           G VQVLK YG+PY IF+MWLDFVTYLHHHGH+QKLPWYRGKEWSYLRGGLTTVDRDYG+ 
Sbjct: 287 GSVQVLKLYGVPYIIFIMWLDFVTYLHHHGHEQKLPWYRGKEWSYLRGGLTTVDRDYGWI 346

Query: 287 NNIHHDIGTHVIHHLFPQIPHYHLIEATKAAKPVLGKYYREPKKSGAFPFHLFESLLRSI 346
           NNIHHDIGTHVIHHLFPQIPHYHL+EATKAAKPVLGKYYREP+KSG FP HLFE+L++SI
Sbjct: 347 NNIHHDIGTHVIHHLFPQIPHYHLVEATKAAKPVLGKYYREPRKSGPFPLHLFENLVKSI 406

Query: 347 REDHYVSDIGEIVYYQTDPELYR 369
            +DHYVSDIG++VYYQTDPELY+
Sbjct: 407 SQDHYVSDIGDVVYYQTDPELYK 429


>28176.m000273 Omega-3 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 452

 Score =  437 bits (1124), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 198/261 (75%), Positives = 229/261 (87%)

Query: 107 NNIVGHFLHSSILVPYHGWRISHRTHHQYHGNVEKDESWVPLPEKIYKELDLSTRIMRFT 166
           N++VGH LHSSILVPYHGWRISHRTHHQ HG+VE DESW PL EKI++ LD  TR +RF+
Sbjct: 186 NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFRNLDGITRTLRFS 245

Query: 167 IPLPMLAYPFYLWSRSPGKEGSHFNPYSNLFAPHERKAVLTSTLCWSVMALLLFCSCFIF 226
           +P PMLAYPFYLWSRSPGK GSHF+P S+LF  +ERK V+TST+CW+ M  LL    F+ 
Sbjct: 246 LPFPMLAYPFYLWSRSPGKTGSHFHPDSDLFVKNERKDVITSTVCWTAMVALLVGLSFVM 305

Query: 227 GPVQVLKFYGIPYWIFVMWLDFVTYLHHHGHDQKLPWYRGKEWSYLRGGLTTVDRDYGFF 286
           GP+Q+LK YGIPYW+FVMWLD VTY+HHHGH+ KLPWYRGKEWSYLRGGLTT+DRDYG+ 
Sbjct: 306 GPIQLLKLYGIPYWVFVMWLDSVTYMHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWI 365

Query: 287 NNIHHDIGTHVIHHLFPQIPHYHLIEATKAAKPVLGKYYREPKKSGAFPFHLFESLLRSI 346
           NNIHHDIGTHVIHHLFPQIPHYHLIEAT+AAKPVLGKYYREPKKSG  PFHL E L+RS+
Sbjct: 366 NNIHHDIGTHVIHHLFPQIPHYHLIEATEAAKPVLGKYYREPKKSGLLPFHLIEDLIRSL 425

Query: 347 REDHYVSDIGEIVYYQTDPEL 367
           ++DHYVSD G+++YYQTDP+L
Sbjct: 426 KKDHYVSDTGDVLYYQTDPQL 446


>29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor
          Length = 460

 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 202/268 (75%), Positives = 228/268 (85%)

Query: 107 NNIVGHFLHSSILVPYHGWRISHRTHHQYHGNVEKDESWVPLPEKIYKELDLSTRIMRFT 166
           N++VGH LHSSILVPYHGWRISHRTHHQ HG+VE DESW PL EKI+K LD  T+ +RF+
Sbjct: 191 NSVVGHLLHSSILVPYHGWRISHRTHHQNHGHVENDESWHPLSEKIFKSLDNVTKTLRFS 250

Query: 167 IPLPMLAYPFYLWSRSPGKEGSHFNPYSNLFAPHERKAVLTSTLCWSVMALLLFCSCFIF 226
           +P PMLAYPFYLWSRSPGK+GSHF+P S LF P ERK ++TST CW+ MA LL    F  
Sbjct: 251 LPFPMLAYPFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSM 310

Query: 227 GPVQVLKFYGIPYWIFVMWLDFVTYLHHHGHDQKLPWYRGKEWSYLRGGLTTVDRDYGFF 286
           GPVQ+LK YGIPYWIFVMWLDFVTYLHHHGH+ KLPWYRGK WSYLRGGLTT+DRDYG+ 
Sbjct: 311 GPVQMLKLYGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWI 370

Query: 287 NNIHHDIGTHVIHHLFPQIPHYHLIEATKAAKPVLGKYYREPKKSGAFPFHLFESLLRSI 346
           NNIHHDIGTHVIHHLFPQIPHYHL+EAT+AAKPV+GKYYREPKKSG  P HL  SL+RS+
Sbjct: 371 NNIHHDIGTHVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSM 430

Query: 347 REDHYVSDIGEIVYYQTDPELYRIPKSK 374
           +EDHYVSD G++VYYQ DP+L  I   K
Sbjct: 431 KEDHYVSDTGDVVYYQKDPKLSGIGGEK 458


>28035.m000362 oleate 12-hydroxylase
          Length = 387

 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 17/255 (6%)

Query: 107 NNIVGHFLHSSILVPYHGWRISHRTHHQYHGNVEKDESWVPLPEK----IYKELDLSTRI 162
           ++IVG  +HS++LVPY  W+ SHR HH   G++E+DE +VP  +       K L+     
Sbjct: 123 DDIVGLIVHSALLVPYFSWKYSHRRHHSNIGSLERDEVFVPKSKSKISWYSKYLNNPPGR 182

Query: 163 MRFTIPLPMLAYPFYLWSRSPGKE----GSHFNPYSNLFAPHERKAVLTSTLCWSVMALL 218
           +       +L +P YL     G+       H++PY  +F+  ER  +  + L       +
Sbjct: 183 VLTLAATLLLGWPLYLAFNVSGRPYDRFACHYDPYGPIFSERERLQIYIADLGIFATTFV 242

Query: 219 LFCSCFIFGPVQVLKFYGIPYWIFVMWLDFVTYLHHHGHDQKLPWYRGKEWSYLRGGLTT 278
           L+ +    G   V++ YG+P  I   +L  +TYL H      +P Y   EW +LRG + T
Sbjct: 243 LYQATMAKGLAWVMRIYGVPLLIVNCFLVMITYLQHT--HPAIPRYGSSEWDWLRGAMVT 300

Query: 279 VDRDYGFFNNIHHDIG-THVIHHLFPQIPHYHLIEATKAAKPVLGKYYREPKKSGAFPFH 337
           VDRDYG  N + H+I  THV HHLF  +PHYH +EATKA KP++G+YYR        PF 
Sbjct: 301 VDRDYGVLNKVFHNIADTHVAHHLFATVPHYHAMEATKAIKPIMGEYYRY----DGTPF- 355

Query: 338 LFESLLRSIREDHYV 352
            +++L R  +E  +V
Sbjct: 356 -YKALWREAKECLFV 369


>29613.m000358 omega-6 desaturase, endoplasmic reticulum
          Length = 383

 Score =  147 bits (372), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 135/257 (52%), Gaps = 19/257 (7%)

Query: 107 NNIVGHFLHSSILVPYHGWRISHRTHHQYHGNVEKDESWVPLPE---KIYKEL--DLSTR 161
           +++VG  LHS +LVPY  W+ SHR HH   G++E+DE +VP  +   + Y +   +   R
Sbjct: 119 DDVVGLILHSCLLVPYFSWKHSHRRHHSNTGSLERDEVFVPKKKSSIRWYSKYLNNPPGR 178

Query: 162 IMRFTIPLPMLAYPFYLWSRSPGKE----GSHFNPYSNLFAPHERKAVLTSTLCWSVMAL 217
           IM   + L  L +P YL     G+       H++PY  ++   ER  +  S      +  
Sbjct: 179 IMTIAVTL-TLGWPLYLAFNVSGRPYDRFACHYDPYGPIYNDRERIEIFISDAGVLAVTF 237

Query: 218 LLFCSCFIFGPVQVLKFYGIPYWIFVMWLDFVTYLHHHGHDQKLPWYRGKEWSYLRGGLT 277
            L+      G   V+  YG+P  +   +L  +T+L H      LP Y   EW +LRG L 
Sbjct: 238 GLYQLAIAKGLAWVVCVYGVPLLVVNSFLVLITFLQHT--HPALPHYDSSEWDWLRGALA 295

Query: 278 TVDRDYGFFNNIHHDI-GTHVIHHLFPQIPHYHLIEATKAAKPVLGKYYREPKKSGAFPF 336
           TVDRDYG  N + H+I  THV HHLF  +PHYH +EATKA KP+LG+YY+    S     
Sbjct: 296 TVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTS----- 350

Query: 337 HLFESLLRSIREDHYVS 353
             ++++ R  +E  YV 
Sbjct: 351 -FYKAMWREAKECIYVE 366


>29696.m000105 Omega-6 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 440

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 13/164 (7%)

Query: 197 FAPHERKAVLTSTLC-WSVMALLLFCSCFIFGPVQVLKFYGIPYWIFVMWLDFVTYLHHH 255
           F P+E K V  S  C ++ MA+      +  G +  +KF+ +P+  +  W+   T +HH 
Sbjct: 260 FRPNEVKRVKISLACVFAFMAIGWPLIVYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHT 319

Query: 256 GHDQKLPWYRGKEWSYLRGGLT-TVDRDYGFFNNI-HHDIGTHVIHHLFPQIPHYHLIEA 313
                +P+    EW+  +  L  TV  DY  +  I  H+I  H+ HH+  +IP Y+L EA
Sbjct: 320 A--PHIPFKSSDEWNAAQAQLNGTVHCDYPRWIEILCHNINVHIPHHISSRIPSYNLPEA 377

Query: 314 TKAAKPVLGKYYREPKKSGAFPFHLFESLLRSI----REDHYVS 353
             + +   GKY  E      + + L ++++       +E++Y++
Sbjct: 378 HISIQEKWGKYLNE----ATWNWRLMKTIMTVCHVYDKEENYIA 417