Jatropha Genome Database

JcCA0265621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265621.10 - phase: 0 /partial
         (162 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29344.m000105 glycerol-3-phosphate dehydrogenase, putative            329   3e-91
30131.m007256 glycerol-3-phosphate dehydrogenase, putative            291   7e-80

>29344.m000105 glycerol-3-phosphate dehydrogenase, putative
          Length = 466

 Score =  329 bits (844), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 159/162 (98%), Positives = 161/162 (99%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL
Sbjct: 305 ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 364

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           NRDMGDSISGKGMIQGVSAVKAFYELLSQPSL+VLHP+EKKPVAPVELCPILKTLYKILI
Sbjct: 365 NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLSVLHPNEKKPVAPVELCPILKTLYKILI 424

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQP 162
           SREHSSQAILQALRDE LNDPRERIEIAQSHAFYRPSLLGQP
Sbjct: 425 SREHSSQAILQALRDETLNDPRERIEIAQSHAFYRPSLLGQP 466


>30131.m007256 glycerol-3-phosphate dehydrogenase, putative
          Length = 467

 Score =  291 bits (746), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 140/161 (86%), Positives = 149/161 (92%)

Query: 1   ESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGEL 60
           ESATSKSVYFAHCTSEMIFITHLLAEEPE+LAGPLLADTYVTLLKGRNAWYGQ LAKG L
Sbjct: 305 ESATSKSVYFAHCTSEMIFITHLLAEEPERLAGPLLADTYVTLLKGRNAWYGQQLAKGGL 364

Query: 61  NRDMGDSISGKGMIQGVSAVKAFYELLSQPSLNVLHPDEKKPVAPVELCPILKTLYKILI 120
           N DMGDSI GKGMIQGVSAVKAFYELLSQ  L+VLHP+EKKPVAPVELCPILK LY+ILI
Sbjct: 365 NLDMGDSIKGKGMIQGVSAVKAFYELLSQSCLSVLHPEEKKPVAPVELCPILKMLYRILI 424

Query: 121 SREHSSQAILQALRDENLNDPRERIEIAQSHAFYRPSLLGQ 161
           +RE  +QAILQALRDE +NDPR+RIEIAQSH FYR SLLG+
Sbjct: 425 TREFPAQAILQALRDETMNDPRDRIEIAQSHVFYRASLLGK 465