Jatropha Genome Database

JcCA0265541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0265541.10 + phase: 1 /pseudo/partial
         (159 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005302 threonine synthase, putative                            258   1e-69
29706.m001318 threonine synthase, putative                            239   5e-64
29657.m000487 receptor serine/threonine kinase, putative              113   3e-26

>29912.m005302 threonine synthase, putative
          Length = 539

 Score =  258 bits (658), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 122/133 (91%), Positives = 128/133 (96%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAVYALK  NGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL
Sbjct: 407 FASAIQIGDPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 466

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRNSG+IGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMAC++ANPPVQVKA+FGAVM
Sbjct: 467 IKLRNSGIIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACKYANPPVQVKADFGAVM 526

Query: 147 DVLKNFLGNRVPK 159
           DVLK +LGN+ PK
Sbjct: 527 DVLKTYLGNKAPK 539


>29706.m001318 threonine synthase, putative
          Length = 531

 Score =  239 bits (609), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 115/127 (90%), Positives = 120/127 (94%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVAL+AL
Sbjct: 398 FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALSAL 457

Query: 87  NKLRNSGVIGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACRFANPPVQVKAEFGAVM 146
            KLRNSGVIGP DRTVVVSTAHGLKF+QSKIDYHS  I DMACRFANPPV VKA+FG+VM
Sbjct: 458 IKLRNSGVIGPTDRTVVVSTAHGLKFSQSKIDYHSSDIQDMACRFANPPVSVKADFGSVM 517

Query: 147 DVLKNFL 153
           DVLK +L
Sbjct: 518 DVLKKYL 524


>29657.m000487 receptor serine/threonine kinase, putative
          Length = 340

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 55/66 (83%), Positives = 59/66 (89%)

Query: 27  FASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTAL 86
           FASAIQIGDP SIDR VYAL+ SNGIVEEATEEELMDAMAQA+STGMFI PHT  AL+AL
Sbjct: 267 FASAIQIGDPASIDRVVYALRKSNGIVEEATEEELMDAMAQANSTGMFIFPHTRTALSAL 326

Query: 87  NKLRNS 92
            +LRNS
Sbjct: 327 IQLRNS 332