Jatropha Genome Database

JcCA0264101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0264101.20 - phase: 0 /pseudo/partial
         (309 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m002004 metal transporter, putative                             355   2e-98
29648.m002003 metal transporter, putative                             278   3e-75
29588.m000852 metal transporter, putative                             278   3e-75
29970.m001011 natural resistance-associated macrophage protein, ...   116   2e-26
30170.m013772 natural resistance-associated macrophage protein, ...   102   3e-22

>29648.m002004 metal transporter, putative
          Length = 528

 Score =  355 bits (910), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 175/259 (67%), Positives = 204/259 (78%), Gaps = 1/259 (0%)

Query: 29  DACRFFLIESGFALFVAFLINLSIISVTATVCLSKNLAPGDVDRCSDLNLNSASFLLQNV 88
           DACR+FL+ESGFALF+AFLIN++++SV+ TVC +  L+  + D+C DL LNSASFLLQNV
Sbjct: 257 DACRYFLVESGFALFIAFLINVAVVSVSGTVCSAHTLSHKNEDQCRDLTLNSASFLLQNV 316

Query: 89  LGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDLKMKKWTRNLMTRCIAIAPXXXX 148
           LG+SSS +YAIALLASGQSSTI+GTYAGQYIMQGFLD+KM+KW RNLMTRCIAI P    
Sbjct: 317 LGKSSSILYAIALLASGQSSTISGTYAGQYIMQGFLDIKMRKWIRNLMTRCIAITPSLIA 376

Query: 149 XXXXXXXXXXXXXXXXXMILSFELPFALIPLLKFSSGSTKMGPYKNSIYVIVISWTLGLM 208
                            MILSFELPFALIPLLKFSS S KMGP+KNSI+VIV SW LGL 
Sbjct: 377 SIIGGSQGAGHLIIIASMILSFELPFALIPLLKFSSSSIKMGPHKNSIFVIVFSWILGLG 436

Query: 209 IIGINIYYLSTGFVDWLIHNNLPKVGNVFIGIIVFPLMAIYIISVIYLTFRKDTVVTYIE 268
           IIGINIYYLSTGFV WLI N+LPKVG + IGI VFPLM IY+++VI+L  RKDTVVT+IE
Sbjct: 437 IIGINIYYLSTGFVGWLIDNDLPKVGKLLIGIAVFPLMIIYLLAVIFLAIRKDTVVTFIE 496

Query: 269 PVNDEQIG-QATMESGLKN 286
           PV D+    Q  ME G++ 
Sbjct: 497 PVKDDPTTVQPNMEQGVRK 515


>29648.m002003 metal transporter, putative
          Length = 498

 Score =  278 bits (711), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 149/208 (71%), Positives = 165/208 (79%), Gaps = 2/208 (0%)

Query: 27  LQDACRFFLIESGFALFVAFLINLSIISVTATVCLSKNLAPGDVDRCSDLNLNSASFLLQ 86
           + DACR+FLIESGFALF+AFLIN++++SV+ TVC  +NL   D DRCSDL LNSASFLLQ
Sbjct: 268 INDACRYFLIESGFALFIAFLINVAVVSVSGTVCTVQNLTQKDADRCSDLTLNSASFLLQ 327

Query: 87  NVLGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDLKMKKWTRNLMTRCIAIAPXX 146
           NVLG+SSST+YAIALLASGQSSTITGTYAGQYIMQGFLDLKM+KW RNLMTRC+AIAP  
Sbjct: 328 NVLGKSSSTLYAIALLASGQSSTITGTYAGQYIMQGFLDLKMRKWIRNLMTRCVAIAPSL 387

Query: 147 XXXXXXXXXXXXXXXXXXXMILSFELPFALIPLLKFSSGSTKMGPYKNSIYVIVISWTLG 206
                              MILSFELPFALIPLLKFSS STKMGP+KNSI +IVISW LG
Sbjct: 388 IVSIIGGSQGAGRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSIIIIVISWILG 447

Query: 207 LMIIGINIYYLSTGF--VDWLIHNNLPK 232
           L IIGINIYYLSTGF  V   +   LPK
Sbjct: 448 LGIIGINIYYLSTGFVAVQANMEQGLPK 475


>29588.m000852 metal transporter, putative
          Length = 546

 Score =  278 bits (710), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 138/266 (51%), Positives = 183/266 (68%)

Query: 27  LQDACRFFLIESGFALFVAFLINLSIISVTATVCLSKNLAPGDVDRCSDLNLNSASFLLQ 86
           +++ACRF+ IES FAL VAFLIN+S+ISV+  VC S NL P D  +C DL+LN ASFLL+
Sbjct: 263 IKEACRFYFIESAFALSVAFLINVSVISVSGAVCNSPNLNPEDQSKCEDLDLNKASFLLK 322

Query: 87  NVLGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDLKMKKWTRNLMTRCIAIAPXX 146
           NVLG  SS ++AIALLASGQSSTITGTYAGQY+MQGFLDL++  W RN +TRC+AI P  
Sbjct: 323 NVLGSWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLVPWVRNFLTRCLAIVPSL 382

Query: 147 XXXXXXXXXXXXXXXXXXXMILSFELPFALIPLLKFSSGSTKMGPYKNSIYVIVISWTLG 206
                              MILSFELPFALIPLLKF+S  TKMG Y NSI +  I+W +G
Sbjct: 383 IVALVGGSAGAGKLIIIASMILSFELPFALIPLLKFTSCKTKMGAYANSIAISAITWIIG 442

Query: 207 LMIIGINIYYLSTGFVDWLIHNNLPKVGNVFIGIIVFPLMAIYIISVIYLTFRKDTVVTY 266
            +++ IN+YYL T F+  L H++L +V  VF+G+  F  MA+Y+ ++ YL FR++T  ++
Sbjct: 443 SLLMLINVYYLGTAFIKILFHSHLTRVAAVFLGLFGFGAMALYLAAIAYLVFRRNTKASH 502

Query: 267 IEPVNDEQIGQATMESGLKNLEILWR 292
           +  +   +  Q   ESG +++  L R
Sbjct: 503 LLALTTPESRQMANESGERSVPSLIR 528


>29970.m001011 natural resistance-associated macrophage protein,
           putative
          Length = 509

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 20/248 (8%)

Query: 27  LQDACRFFLIESGFALFVAFLINLSIISVTATVCLSKNLAPGDVDRCSDLNLNSASFLLQ 86
           +Q+A R++ IES  AL ++F+INL + +V A       LA       + + L +A   LQ
Sbjct: 269 VQEALRYYSIESTVALVISFVINLFVTTVFAKAFYGTELA-------NSIGLVNAGQYLQ 321

Query: 87  NVLGRSSSTI---YAIALLASGQSSTITGTYAGQYIMQGFLDLKMKKWTRNLMTRCIAIA 143
           N  G     I   +AI LLA+GQSSTITGTYAGQ+IM GFL+L++KKW R L+TR  AI 
Sbjct: 322 NKYGGGLFPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSCAIV 381

Query: 144 PXXXXXXXXXXXXXXXXXXXXXM--ILSFELPFALIPLLKFSSGSTKMGPYKNSIYVIVI 201
           P                     +  + S ++PFALIPLL   S    MG +K    + ++
Sbjct: 382 PTMIVALVFDTSEDTLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGPLLKMV 441

Query: 202 SWTLGLMIIGINIYYLSTGFVDWLIHNNLPKVGNVFIGIIVFPLMAIYIISVIYLTFRKD 261
           SW +  ++I IN Y L   F          +V  V     V    A Y+  ++YL  R  
Sbjct: 442 SWLVAALVIVINGYLLIEFFST--------EVNGVPFATAVCIFTAAYVAFILYLVSRGI 493

Query: 262 TVVTYIEP 269
              ++  P
Sbjct: 494 AFASWCRP 501


>30170.m013772 natural resistance-associated macrophage protein,
           putative
          Length = 462

 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 12/172 (6%)

Query: 27  LQDACRFFLIESGFALFVAFLINLSIISVTATVCLSKNLAPGDVDRCSDLNLNSASFLLQ 86
           +Q+A  ++LIES  AL ++F+INL + SV A      N       + + + L +A   LQ
Sbjct: 289 VQEALNYYLIESSVALLISFMINLFVTSVFAKGFHGSN-------QANSIGLVNAGQYLQ 341

Query: 87  NVLGRSSSTI---YAIALLASGQSSTITGTYAGQYIMQGFLDLKMKKWTRNLMTRCIAIA 143
              G     I   + I LLA+GQSSTITGTYAGQ+IM GFL+L++KKW R L+TR  AI 
Sbjct: 342 EKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIV 401

Query: 144 PXXXXXXXXXXXXXXXXXXXXXM--ILSFELPFALIPLLKFSSGSTKMGPYK 193
           P                     +  + S ++PFALIPLL   S    MG ++
Sbjct: 402 PTMIVALVFNKSEASLDILNEWLNVLQSIQIPFALIPLLTLVSKEQVMGSFR 453