Jatropha Genome Database

JcCA0259921.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0259921.10 - phase: 0 /partial
         (220 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30075.m001158 sphingolipid fatty acid alpha hydroxylase               412   e-116

>30075.m001158 sphingolipid fatty acid alpha hydroxylase
          Length = 237

 Score =  412 bits (1059), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 191/220 (86%), Positives = 208/220 (94%)

Query: 1   VGHLGEAYEEWVHQPIVSKEGPRFFESDFWEFLTRTVWWAIPVIWLPVVCWCISMSVRMG 60
           VGHLGEAYEEWVHQPIVS+EGPRFFESDFWEFLT TVWWA+PVIWLPVVCW +S+SVRMG
Sbjct: 18  VGHLGEAYEEWVHQPIVSREGPRFFESDFWEFLTLTVWWAVPVIWLPVVCWLVSLSVRMG 77

Query: 61  HKPSEIALMVASGILIWTLLEYSLHRFVFHIKTKTYWWNTLHYLIHGCHHKHPMDGLRLV 120
           H PSEIA MV SG+ IWTL+EY++HRF+FHIKT +YW NT+HYL+HGCHHKHPMDGLRLV
Sbjct: 78  HTPSEIATMVVSGVFIWTLVEYTMHRFLFHIKTSSYWGNTIHYLLHGCHHKHPMDGLRLV 137

Query: 121 FPPAATAVLCVPFWNLVQLFATPSTAPALFGGGLLGYVMYDCTHYYLHHGQPSSGVPKDL 180
           FPPAATAVLCVPFWNL++LFATPSTAPALFGGGLLGYVMYDCTHYYLHHGQPS GVPKDL
Sbjct: 138 FPPAATAVLCVPFWNLIKLFATPSTAPALFGGGLLGYVMYDCTHYYLHHGQPSLGVPKDL 197

Query: 181 KKYHLNHHFRIQNMGFGITSALWDRVFGTLPPSKVVEKSR 220
           KKYH+NHHFR+Q MGFGITS+LWDRVFGTLPP KVV KSR
Sbjct: 198 KKYHMNHHFRLQTMGFGITSSLWDRVFGTLPPPKVVAKSR 237