Jatropha Genome Database

JcCA0259651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0259651.10 + phase: 2 /pseudo/partial
         (377 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29794.m003436 catalytic, putative                                     362   e-100

>29794.m003436 catalytic, putative
          Length = 983

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/251 (70%), Positives = 199/251 (79%)

Query: 1   LNAKNGELLKHESAAFSGGFSGEXXXXXXXXXXXXXXXXXTLITVNFQNGDINFQKTYIS 60
           +NAKNGELLKHESAA SGGFSGE                  L  V+FQNG+I+FQKTYIS
Sbjct: 206 INAKNGELLKHESAALSGGFSGEVSLVSTNTLVVLDSTGSALTAVSFQNGEISFQKTYIS 265

Query: 61  DLIEDPLGTVKILPSKLTGMFTLTINSFTIFIRVISEGKLEVVDKINHVTAVSDALSFSE 120
           DLI DP+G   I+PSKL G+F L  +SF IFIRV  EG LEV+DKI HVTAVSD+LS  E
Sbjct: 266 DLIADPMGMAMIIPSKLIGVFALKTHSFMIFIRVTDEGNLEVIDKIKHVTAVSDSLSLLE 325

Query: 121 GQQAFALIEHQDNDIYLIVKLGHDWNNDLLKERIKIDHQRGLVHKVFINNYIRTDRSHGF 180
             QAFA++EH+  DIYL VKL H+WN DLLKE IK+DHQRG+VHKVFINNYIRTDR+HGF
Sbjct: 326 DWQAFAIVEHRGEDIYLTVKLSHNWNGDLLKESIKMDHQRGIVHKVFINNYIRTDRTHGF 385

Query: 181 RALIVMEDHSLLLLQQGETVWSREDGLASIVDVTISELPVEKKGVSVAKVEQNLFEWLKG 240
           RALIVMEDHSLLLLQQGE VWSREDGLASI+DVT SELPVEK+GVSVAKVEQNLFEWLKG
Sbjct: 386 RALIVMEDHSLLLLQQGEIVWSREDGLASIIDVTTSELPVEKEGVSVAKVEQNLFEWLKG 445

Query: 241 RNLVLPVLIIL 251
             L L   ++L
Sbjct: 446 HILKLKGTLML 456