Jatropha Genome Database

JcCA0258941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0258941.10 + phase: 0 
         (131 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29577.m000452 strictosidine synthase, putative                        244   5e-66
30221.m002257 strictosidine synthase, putative                        113   3e-26
28094.m000175 strictosidine synthase, putative                        102   5e-23
28094.m000178 strictosidine synthase, putative                         96   3e-21
29739.m003743 Adipocyte plasma membrane-associated protein, puta...    67   2e-12
30138.m003846 strictosidine synthase, putative                         61   1e-10
29830.m001424 Adipocyte plasma membrane-associated protein, puta...    51   2e-07

>29577.m000452 strictosidine synthase, putative
          Length = 372

 Score =  244 bits (624), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 127/131 (96%)

Query: 1   MKYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNFYF 60
           MKYW+EGP+TG VE+VA+LPGFPDN+R+N+KG +WVAIDCCRT+AQEIL+HNPWIR+ YF
Sbjct: 242 MKYWIEGPKTGNVELVANLPGFPDNIRVNDKGHYWVAIDCCRTRAQEILTHNPWIRSVYF 301

Query: 61  RLPVKMSLLARMMGMKMYTVISLFNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIGTV 120
           RLP++MS+LAR+MGMKMYTV+SLFNENGEILEVLEDP G+VMKLVSEVREV+GKLWIGTV
Sbjct: 302 RLPIRMSILARLMGMKMYTVVSLFNENGEILEVLEDPKGVVMKLVSEVREVQGKLWIGTV 361

Query: 121 AHNHIATLPYP 131
           AHNHIATLPYP
Sbjct: 362 AHNHIATLPYP 372


>30221.m002257 strictosidine synthase, putative
          Length = 391

 Score =  113 bits (282), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 1/120 (0%)

Query: 2   KYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNFYFR 61
           KYWL+G + G  EV+A LPGFPDNVR NE+G FWVA+ C RT    I +  P +R F  +
Sbjct: 261 KYWLKGEKAGTTEVLAILPGFPDNVRTNEEGNFWVAVHCRRTYYSYICALYPKLRTFLLK 320

Query: 62  LPVKMSLLARM-MGMKMYTVISLFNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIGTV 120
           LP+   +     +G +++ V   ++  G++L++LED  G V+K +SEV E  GKLW+G+V
Sbjct: 321 LPISAKIHYLFHIGGRLHAVAVKYSPEGKLLQILEDSQGKVVKAISEVEERDGKLWMGSV 380


>28094.m000175 strictosidine synthase, putative
          Length = 372

 Score =  102 bits (254), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 1/120 (0%)

Query: 2   KYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNFYFR 61
           ++WL GP  G+V+V A LPGFPDN+R N KG+FWVA+        ++   N WI     +
Sbjct: 243 RFWLHGPNAGKVDVFAKLPGFPDNIRRNSKGEFWVALHAKEGFLAKLALSNSWIGKTLLK 302

Query: 62  LPVKMSLLARMM-GMKMYTVISLFNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIGTV 120
            P+    L  ++ G K +      + +G+I++VLED +G  ++ +SEV E  GKLWIG+V
Sbjct: 303 FPLSFKQLHSLLVGGKPHATAIKLSGDGKIVQVLEDCDGKRLRFISEVEEKDGKLWIGSV 362


>28094.m000178 strictosidine synthase, putative
          Length = 375

 Score = 96.3 bits (238), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 79/122 (64%), Gaps = 5/122 (4%)

Query: 1   MKYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQE-ILSHNPWIRNFY 59
           +KYW++  + G +EV A +PGFPDN++ + +G +WVAI+  R +  E +LSH PWI N  
Sbjct: 246 LKYWIKTSKAGILEVFAQVPGFPDNIKRSPRGGYWVAINSRRDKFLEWVLSH-PWIGNSL 304

Query: 60  FRLPVKMSLLARMMGMKMYTVISL-FNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIG 118
            +LP  +  +  ++G    T +++  +ENG+ILEV ED N    K +SEV E  GKLWIG
Sbjct: 305 IKLPFDLMKIYSILGKYRGTGMAVRLDENGDILEVFEDRN--RFKTLSEVMEKDGKLWIG 362

Query: 119 TV 120
           ++
Sbjct: 363 SI 364


>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 356

 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 2   KYWLEGPRTGRVEVVAD-LPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNFYF 60
           K+WL+G   G+ E + D LPG PDN+ L   G FW+ +        E +  +   ++   
Sbjct: 227 KHWLKGEDKGKTETLIDNLPGAPDNINLAPDGSFWICLLQVAADGLEFVHTSKASKHLVA 286

Query: 61  RLPVKMSLLARMMGMKMYTVISLFNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIGTV 120
             P    L+  + G++   ++     +G+I    +DP+G V+  V+   E  G L++G++
Sbjct: 287 SFP---KLIELVNGVEKNAMVVNVAADGKITRKFDDPDGKVVSFVTSAVEFDGHLYLGSL 343

Query: 121 AHNHIATLP 129
            +N +  LP
Sbjct: 344 KNNFVGKLP 352


>30138.m003846 strictosidine synthase, putative
          Length = 352

 Score = 60.8 bits (146), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 55/128 (42%), Gaps = 27/128 (21%)

Query: 1   MKYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNFYF 60
           +K+ L     G   V A L  FPDN+R N+ G FWVA++  R + Q  +     IR    
Sbjct: 250 LKFPLSSYGVGVPHVFASLDRFPDNIRRNDNGDFWVALNTARGKLQGAVEDPVGIR---- 305

Query: 61  RLPVKMSLLARMMGMKMYTVISLFNENGEILEVLEDPNGLVMKLVSEVREVKGKLWIGTV 120
                                  FNE G +++V+    G  +  VSE+ E  G+LW G+ 
Sbjct: 306 -----------------------FNEYGRVVQVVNGNGGDTLDSVSEIEEHDGRLWFGSP 342

Query: 121 AHNHIATL 128
              ++ TL
Sbjct: 343 TQPYVGTL 350


>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 380

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 34/57 (59%)

Query: 2   KYWLEGPRTGRVEVVADLPGFPDNVRLNEKGQFWVAIDCCRTQAQEILSHNPWIRNF 58
           KY+++G + G++E    LPG PDN+  +  G FW+A+    +   +++   P+IR F
Sbjct: 256 KYYIQGNKKGQIENFISLPGAPDNIHSDGHGHFWIALSSGNSAFVDLVYRYPFIRKF 312