Jatropha Genome Database

JcCA0258491.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0258491.10 - phase: 0 /partial
         (219 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27704.m000147 cholinephosphate cytidylyltransferase, putative         328   9e-91
29843.m000285 conserved hypothetical protein                          114   3e-26
30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative   109   8e-25

>27704.m000147 cholinephosphate cytidylyltransferase, putative
          Length = 298

 Score =  328 bits (842), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 153/172 (88%), Positives = 162/172 (94%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVM + ERYESL
Sbjct: 17  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMNDQERYESL 76

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADASGAGKDVYEFVKKVGRFKET 150
            HCKWVDEVI DAPWV+TQEFLDKH IDYVAHDSLPYADASGAG DVYEFVK +G+FKET
Sbjct: 77  RHCKWVDEVIPDAPWVLTQEFLDKHRIDYVAHDSLPYADASGAGNDVYEFVKSIGKFKET 136

Query: 151 KRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKELGVSFVKEKRLRVNMRL 202
           KRT+GISTSDIIMRIVKDYN+YVMRNL RGY+RKELGVS+VKEKRLR +M L
Sbjct: 137 KRTEGISTSDIIMRIVKDYNEYVMRNLARGYSRKELGVSYVKEKRLRAHMGL 188


>29843.m000285 conserved hypothetical protein
          Length = 387

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 8/140 (5%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           +RVY DG +DL H+GHA +L QAK       L+VG  +DE     KG  V+   ER   +
Sbjct: 30  IRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLPMEERLALV 87

Query: 91  HHCKWVDEVITDAPWVITQEFLDK----HNIDYVAHDSLPYADASGAGKDVYEFVKKVGR 146
              KWVDEVI +AP+ IT++F+++    H IDY+ H   P     G   D Y   K+ GR
Sbjct: 88  SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGR 145

Query: 147 FKETKRTDGISTSDIIMRIV 166
           +K+ KRT+G+S++DI+ RI+
Sbjct: 146 YKQIKRTEGVSSTDIVGRIL 165



 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 33  VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGK--TVMTESERYESL 90
           VY DG +DLFH GH   L  A++     +LLVG   D+I  +++G+   +M   ER  S+
Sbjct: 223 VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGIHTDQIVSEHRGEHYPIMHLHERSLSV 280

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSLPYADASGAG-KDVYEFVKKVGRFKE 149
             C++VDEVI  APW ++++ +   NI  V H ++   ++  AG  D Y   K +G F+ 
Sbjct: 281 LACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTVAECNSLLAGISDPYAVPKSMGIFRT 340

Query: 150 TKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYTRKE 185
            +    I TS +  RIV ++  Y+ RN  +  + K+
Sbjct: 341 LESPKNIITSSVAQRIVANHEAYMKRNSKKAKSEKK 376


>30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative
          Length = 418

 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 58/140 (41%), Positives = 82/140 (58%), Gaps = 8/140 (5%)

Query: 31  VRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKGKTVMTESERYESL 90
           +RVY DG +D+ H+GH  +L QA+       L+VG  +D      KG  V    ER   +
Sbjct: 55  IRVYMDGCFDMMHYGHCNALRQARAL--GDELVVGVVSDAEIIANKGPPVTPLHERMIMV 112

Query: 91  HHCKWVDEVITDAPWVITQEFLDK----HNIDYVAHDSLPYADASGAGKDVYEFVKKVGR 146
           +  KWVDEVI DAP+ IT+EF+ K    +NIDY+ H   P     G   D Y   KK GR
Sbjct: 113 NAVKWVDEVIPDAPYAITEEFMKKLFEEYNIDYIIHGDDPCVLPDGT--DAYALAKKAGR 170

Query: 147 FKETKRTDGISTSDIIMRIV 166
           +K+ KRT+G+S++DI+ R++
Sbjct: 171 YKQIKRTEGVSSTDIVGRML 190



 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 4/95 (4%)

Query: 33  VYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHKYKG--KTVMTESERYESL 90
           VY DG +DLFH GH   L  A+      +LLVG  ND+     +G  + +M   ER  S+
Sbjct: 254 VYIDGAFDLFHAGHVEILRVARGL--GDFLLVGIHNDQTVSARRGAHRPIMNLHERSLSV 311

Query: 91  HHCKWVDEVITDAPWVITQEFLDKHNIDYVAHDSL 125
             C++VDEVI  APW ++++ +   NI  V H ++
Sbjct: 312 LACRYVDEVIIGAPWEVSKDMITTFNIFLVVHGTV 346