Jatropha Genome Database

JcCA0257131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0257131.10 + phase: 2 /pseudo/partial
         (315 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29628.m000757 phosphoglucomutase, putative                            451   e-127

>29628.m000757 phosphoglucomutase, putative
          Length = 561

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 222/284 (78%), Positives = 243/284 (85%)

Query: 32  FRCASLDGDADRLVYFSVPSSDSSTIDLVDGDKILSLFAVFIKEQLAVLNTEGEEKISDD 91
            RCASLDGDADRLVYFSVP S+SS IDLVDGDKILSLFAVFIKEQL+VLNT+G+EK S++
Sbjct: 278 IRCASLDGDADRLVYFSVPVSNSSKIDLVDGDKILSLFAVFIKEQLSVLNTDGDEKNSEN 337

Query: 92  YQARVGVIQTAYANGASTYYLKQLGLEVVFTPTGVKYLHEKAAQYDIGIYFEANGHGTIL 151
           YQAR+GVIQTAYANGAST YLKQLGLEVV TPTGVKYLHE+AAQYDIGIYFEANGHGTIL
Sbjct: 338 YQARIGVIQTAYANGASTDYLKQLGLEVVLTPTGVKYLHEQAAQYDIGIYFEANGHGTIL 397

Query: 152 FSESFLSWLEERCNELSSKNKDSEQHKAALRLLAVSRLINQAVGDALSGLLLVEAILRHM 211
           FSE FLSWLE R NELS + KDSE+HKAA+RLLAVS+LINQAVGDALSGLLLVEAIL+H 
Sbjct: 398 FSECFLSWLEARSNELSLEKKDSERHKAAMRLLAVSKLINQAVGDALSGLLLVEAILQHK 457

Query: 212 GWSIHKWAELYQDLPSRQIKXXXXXXXXXXXXXXXXXXXKPLGIQDAINAQVAKYSHGRC 271
           GWSI+KW+ELYQDLPSRQ+K                   +P GIQDAINA++AKYS GR 
Sbjct: 458 GWSIYKWSELYQDLPSRQLKVKVVDRTAVVTANAETVVVRPPGIQDAINAEIAKYSRGRS 517

Query: 272 FIRPSGTEDFIRVYAEASTQEEADSLAGSVTKLVDQYLGFYGSR 315
           FIRPSGTED IRVYAEASTQE ADSLA SV KLVD+ LGF  +R
Sbjct: 518 FIRPSGTEDVIRVYAEASTQEAADSLANSVAKLVDRLLGFGSTR 561