Jatropha Genome Database

JcCA0255951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0255951.10 - phase: 0 /pseudo
         (162 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27561.m000298 Cyanate hydratase, putative                             208   9e-55

>27561.m000298 Cyanate hydratase, putative
          Length = 164

 Score =  208 bits (530), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 99/114 (86%), Positives = 106/114 (92%)

Query: 1   MGETKATMANHLLAVKRNSGKNYSQIAEETGLTNVYVAQLLKRQAQLKPETAPKLRAALP 60
           M ETKAT+ N LLAVK NSGK+YS+IAEETGLTNVYVAQL +RQAQLKP+TA KLRA LP
Sbjct: 1   MAETKATLTNRLLAVKHNSGKSYSEIAEETGLTNVYVAQLFRRQAQLKPDTALKLRAVLP 60

Query: 61  ELSDEMLQEMMRPPMRSYDPNLIQEPTVYRLNEAVMHFGESIKEIINEEFGDGI 114
           ELSDE+L EMMRPPMRSYDPNLIQEP+VYRLNEAVMHFGESIKEIINEEFGDGI
Sbjct: 61  ELSDELLGEMMRPPMRSYDPNLIQEPSVYRLNEAVMHFGESIKEIINEEFGDGI 114