Jatropha Genome Database
- JcCA0254771.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0254771.20 + phase: 0
(99 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m014181 Gibberellin-regulated protein 1 precursor, putative 143 2e-35
30170.m014180 Gibberellin-regulated protein 1 precursor, putative 105 6e-24
29728.m000820 Gibberellin-regulated protein 2 precursor, putative 92 6e-20
29728.m000819 Gibberellin-regulated protein 1 precursor, putative 91 1e-19
29736.m002118 Gibberellin-regulated protein 3 precursor, putative 86 5e-18
30147.m014003 Gibberellin-regulated protein 1 precursor, putative 82 4e-17
29822.m003397 extensin, proline-rich protein, putative 70 2e-13
29970.m001021 conserved hypothetical protein 65 6e-12
30170.m013769 GAST1 protein precursor, putative 63 3e-11
28470.m000429 GAST1 protein precursor, putative 60 2e-10
29801.m003065 GAST1 protein precursor, putative 54 1e-08
29904.m002938 Gibberellin-regulated protein 4 precursor, putative 51 1e-07
27451.m000247 RSI-1 protein precursor, putative 46 3e-06
>30170.m014181 Gibberellin-regulated protein 1 precursor, putative
Length = 101
Score = 143 bits (361), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
Query: 3 ISKFLLASLFISLFVLQLAKATQT-ENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRA 61
ISK L+ASLFISL VL L +A Q E +L A+ KIDC SAC RCRLASRQR+CHRA
Sbjct: 4 ISKPLIASLFISLLVLHLVEADQMQEKASLAATSQKKIDCASACKTRCRLASRQRMCHRA 63
Query: 62 CGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
CGTCCARCNCVPPGTSGNHE C CYASL THGGR KCP
Sbjct: 64 CGTCCARCNCVPPGTSGNHESCRCYASLLTHGGRLKCP 101
>30170.m014180 Gibberellin-regulated protein 1 precursor, putative
Length = 96
Score = 105 bits (261), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 1 MVISKFLLASLFISLFVLQLAKATQTENTNL-NASPIPKIDCGSACSNRCRLASRQRLCH 59
M I K LL + FVL L ++ ++ P+ KI AC+ RC+L+SR LC
Sbjct: 1 MAIFKTLLFVILPLAFVLHLVQSNPVLIKDVVEIPPLQKI----ACAARCQLSSRPHLCK 56
Query: 60 RACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
RACGTCC RC+CVPPGTSGN++VCPCYA++TTHGGR KCP
Sbjct: 57 RACGTCCVRCDCVPPGTSGNYDVCPCYANMTTHGGRHKCP 96
>29728.m000820 Gibberellin-regulated protein 2 precursor, putative
Length = 90
Score = 91.7 bits (226), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 48/62 (77%)
Query: 38 KIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRK 97
+IDC S C RC ASR ++C RAC +CC RC+CVPPGTSGN +VCPCYA L THGGR K
Sbjct: 29 EIDCKSKCEYRCSKASRHKMCIRACNSCCERCHCVPPGTSGNRDVCPCYAHLKTHGGRLK 88
Query: 98 CP 99
CP
Sbjct: 89 CP 90
>29728.m000819 Gibberellin-regulated protein 1 precursor, putative
Length = 113
Score = 90.5 bits (223), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 48/61 (78%)
Query: 39 IDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKC 98
I+CG ACS RCR +SR+ +CHRAC TCC RC CVPPGT GN VCPCYASL THG + KC
Sbjct: 53 INCGYACSRRCRESSRKNVCHRACRTCCLRCQCVPPGTYGNKHVCPCYASLRTHGNKPKC 112
Query: 99 P 99
P
Sbjct: 113 P 113
>29736.m002118 Gibberellin-regulated protein 3 precursor, putative
Length = 105
Score = 85.5 bits (210), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 18 LQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTS 77
+Q+ T N +P +DCG C RC L SR +C RACGTCC RC CVPPGTS
Sbjct: 23 IQIEDQTTQLVKGANRRLLPFMDCGGLCKVRCSLHSRPNVCTRACGTCCYRCKCVPPGTS 82
Query: 78 GNHEVC-PCYASLTTHGGRRKCP 99
GN +VC CY +TTHG + KCP
Sbjct: 83 GNRDVCGKCYTDMTTHGNKTKCP 105
>30147.m014003 Gibberellin-regulated protein 1 precursor, putative
Length = 90
Score = 82.4 bits (202), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 32 NASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVC-PCYASLT 90
N + +IDCG C RC L SR C+RACGTCC RC CVPPGTSGN EVC CY +T
Sbjct: 22 NRRLMQEIDCGGLCKVRCSLHSRPNTCNRACGTCCERCKCVPPGTSGNREVCGKCYTEMT 81
Query: 91 THGGRRKCP 99
THG + KCP
Sbjct: 82 THGNKTKCP 90
>29822.m003397 extensin, proline-rich protein, putative
Length = 234
Score = 70.1 bits (170), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 38 KIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVC-PCYASLTTHGGRR 96
+ DC C+ RC+L SR+ +C RAC TCC RC CVPPGT GN E C CY +TT +
Sbjct: 172 RADCIPLCAERCKLHSRKNICTRACITCCDRCKCVPPGTYGNREKCGKCYTDMTTRHNKP 231
Query: 97 KCP 99
KCP
Sbjct: 232 KCP 234
>29970.m001021 conserved hypothetical protein
Length = 101
Score = 65.1 bits (157), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 44/99 (44%)
Query: 1 MVISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHR 60
+++S FLL L +S LQ A L A C C RC A + C +
Sbjct: 3 LLLSTFLLIVLIVSSSFLQSTMAAPPPTGPLTAPSPTASYCELKCGARCANAGYKDRCMK 62
Query: 61 ACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
CG CCA C CVP GT GN CPCY G KCP
Sbjct: 63 YCGICCAECKCVPSGTYGNKSECPCYRDKKNSKGNPKCP 101
>30170.m013769 GAST1 protein precursor, putative
Length = 88
Score = 62.8 bits (151), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 12 FISLFVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNC 71
F++LF++ + + S C S C RC A + C + CG CC +C C
Sbjct: 5 FVALFLVCFVLTSSLFEVTVAGSGF----CDSKCEKRCEKAGVKDRCLKYCGICCEKCKC 60
Query: 72 VPPGTSGNHEVCPCYASLTTHGGRRKCP 99
VP GT GN CPCY + G+ KCP
Sbjct: 61 VPSGTYGNKHECPCYRDMKNSKGKPKCP 88
>28470.m000429 GAST1 protein precursor, putative
Length = 116
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 3 ISKFLLASLFISLFVLQLAKATQTENTNLNASPIPKI----------DCGSACSNRCRLA 52
+ F+LA + + + + + S +PK DCG C+ RC
Sbjct: 10 FAMFVLALMLLFILESHASTSEAPAPQPQQNSSLPKYGSTQGSLQPQDCGPQCTRRCSKT 69
Query: 53 SRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
+ C C CCA+C CVP GT GN + CPCY + T G KCP
Sbjct: 70 QYHKPCMFFCQKCCAKCLCVPSGTYGNKQTCPCYNNWKTKRGGPKCP 116
>29801.m003065 GAST1 protein precursor, putative
Length = 88
Score = 53.9 bits (128), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 41 CGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
C + C++RC A + C + C CCA C CVP GT GN CPCY G+ KCP
Sbjct: 30 CANKCNDRCARAGVKDRCIKYCEICCAECKCVPSGTYGNKLECPCYRDKKNSKGKSKCP 88
>29904.m002938 Gibberellin-regulated protein 4 precursor, putative
Length = 79
Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 16 FVLQLAKATQTENTNLNASPIPKIDCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPG 75
FV+ ++ A + K C AC RC + C C CC +C CVP G
Sbjct: 3 FVIDISHAG-------GEGSLTKEQCPKACDFRCSATHHRGNCIDLCNKCCEKCLCVPSG 55
Query: 76 TSGNHEVCPCYASLTTHGGRRKCP 99
T G+ E CPCY + T G KCP
Sbjct: 56 TYGHKEECPCYNNWKTKEGTPKCP 79
>27451.m000247 RSI-1 protein precursor, putative
Length = 95
Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 40 DCGSACSNRCRLASRQRLCHRACGTCCARCNCVPPGTSGNHEVCPCYASLTTHGGRRKCP 99
DC C+ RC S ++ C C CC++C CVPPG GN +VCPCY + T G+ KCP
Sbjct: 36 DCKPRCTYRCSATSHKKPCMFFCLKCCSKCLCVPPGVYGNKQVCPCYNNWKTKEGKPKCP 95