Jatropha Genome Database

JcCA0254771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254771.10 + phase: 0 
         (103 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014181 Gibberellin-regulated protein 1 precursor, putative     109   3e-25
30170.m014180 Gibberellin-regulated protein 1 precursor, putative     106   2e-24
30147.m014003 Gibberellin-regulated protein 1 precursor, putative      90   2e-19
29728.m000820 Gibberellin-regulated protein 2 precursor, putative      89   6e-19
29736.m002118 Gibberellin-regulated protein 3 precursor, putative      89   6e-19
29728.m000819 Gibberellin-regulated protein 1 precursor, putative      86   4e-18
29822.m003397 extensin, proline-rich protein, putative                 70   2e-13
28470.m000429 GAST1 protein precursor, putative                        59   4e-10
30170.m013769 GAST1 protein precursor, putative                        58   7e-10
29801.m003065 GAST1 protein precursor, putative                        54   2e-08
29970.m001021 conserved hypothetical protein                           53   3e-08
29904.m002938 Gibberellin-regulated protein 4 precursor, putative      50   3e-07

>30170.m014181 Gibberellin-regulated protein 1 precursor, putative
          Length = 101

 Score =  109 bits (272), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 2/84 (2%)

Query: 20  HFAEADHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPG 79
           H  EAD    K+ L AT+   ++IDC SAC  RC+L+SR  +C RACGTCCARC CVPPG
Sbjct: 20  HLVEADQMQEKASLAATSQ--KKIDCASACKTRCRLASRQRMCHRACGTCCARCNCVPPG 77

Query: 80  TAGNYEACPCYASLTTHGGRRKCP 103
           T+GN+E+C CYASL THGGR KCP
Sbjct: 78  TSGNHESCRCYASLLTHGGRLKCP 101


>30170.m014180 Gibberellin-regulated protein 1 precursor, putative
          Length = 96

 Score =  106 bits (265), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 63/84 (75%), Gaps = 6/84 (7%)

Query: 20  HFAEADHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPG 79
           H  +++   +K  ++    P ++I    AC ARCQLSSRP+LCKRACGTCC RC CVPPG
Sbjct: 19  HLVQSNPVLIKDVVEI--PPLQKI----ACAARCQLSSRPHLCKRACGTCCVRCDCVPPG 72

Query: 80  TAGNYEACPCYASLTTHGGRRKCP 103
           T+GNY+ CPCYA++TTHGGR KCP
Sbjct: 73  TSGNYDVCPCYANMTTHGGRHKCP 96


>30147.m014003 Gibberellin-regulated protein 1 precursor, putative
          Length = 90

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 47/65 (72%), Gaps = 1/65 (1%)

Query: 40  AEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGG 98
            +EIDCG  C  RC L SRPN C RACGTCC RCKCVPPGT+GN E C  CY  +TTHG 
Sbjct: 26  MQEIDCGGLCKVRCSLHSRPNTCNRACGTCCERCKCVPPGTSGNREVCGKCYTEMTTHGN 85

Query: 99  RRKCP 103
           + KCP
Sbjct: 86  KTKCP 90


>29728.m000820 Gibberellin-regulated protein 2 precursor, putative
          Length = 90

 Score = 88.6 bits (218), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 41/64 (64%), Positives = 47/64 (73%)

Query: 40  AEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGR 99
           A+EIDC S C  RC  +SR  +C RAC +CC RC CVPPGT+GN + CPCYA L THGGR
Sbjct: 27  AQEIDCKSKCEYRCSKASRHKMCIRACNSCCERCHCVPPGTSGNRDVCPCYAHLKTHGGR 86

Query: 100 RKCP 103
            KCP
Sbjct: 87  LKCP 90


>29736.m002118 Gibberellin-regulated protein 3 precursor, putative
          Length = 105

 Score = 88.6 bits (218), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 23  EADHQTVKSKLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAG 82
           + + QT +    A       +DCG  C  RC L SRPN+C RACGTCC RCKCVPPGT+G
Sbjct: 24  QIEDQTTQLVKGANRRLLPFMDCGGLCKVRCSLHSRPNVCTRACGTCCYRCKCVPPGTSG 83

Query: 83  NYEAC-PCYASLTTHGGRRKCP 103
           N + C  CY  +TTHG + KCP
Sbjct: 84  NRDVCGKCYTDMTTHGNKTKCP 105


>29728.m000819 Gibberellin-regulated protein 1 precursor, putative
          Length = 113

 Score = 85.5 bits (210), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/61 (67%), Positives = 47/61 (77%)

Query: 43  IDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKC 102
           I+CG AC+ RC+ SSR N+C RAC TCC RC+CVPPGT GN   CPCYASL THG + KC
Sbjct: 53  INCGYACSRRCRESSRKNVCHRACRTCCLRCQCVPPGTYGNKHVCPCYASLRTHGNKPKC 112

Query: 103 P 103
           P
Sbjct: 113 P 113


>29822.m003397 extensin, proline-rich protein, putative
          Length = 234

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 1/61 (1%)

Query: 44  DCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEAC-PCYASLTTHGGRRKC 102
           DC   C  RC+L SR N+C RAC TCC RCKCVPPGT GN E C  CY  +TT   + KC
Sbjct: 174 DCIPLCAERCKLHSRKNICTRACITCCDRCKCVPPGTYGNREKCGKCYTDMTTRHNKPKC 233

Query: 103 P 103
           P
Sbjct: 234 P 234


>28470.m000429 GAST1 protein precursor, putative
          Length = 116

 Score = 58.9 bits (141), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 37/72 (51%)

Query: 32  KLDATNSPAEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYA 91
           K  +T    +  DCG  CT RC  +     C   C  CCA+C CVP GT GN + CPCY 
Sbjct: 45  KYGSTQGSLQPQDCGPQCTRRCSKTQYHKPCMFFCQKCCAKCLCVPSGTYGNKQTCPCYN 104

Query: 92  SLTTHGGRRKCP 103
           +  T  G  KCP
Sbjct: 105 NWKTKRGGPKCP 116


>30170.m013769 GAST1 protein precursor, putative
          Length = 88

 Score = 58.2 bits (139), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           C S C  RC+ +   + C + CG CC +CKCVP GT GN   CPCY  +    G+ KCP
Sbjct: 30  CDSKCEKRCEKAGVKDRCLKYCGICCEKCKCVPSGTYGNKHECPCYRDMKNSKGKPKCP 88


>29801.m003065 GAST1 protein precursor, putative
          Length = 88

 Score = 53.5 bits (127), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%)

Query: 40  AEEIDCGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGR 99
           A+ + C + C  RC  +   + C + C  CCA CKCVP GT GN   CPCY       G+
Sbjct: 25  AKSLFCANKCNDRCARAGVKDRCIKYCEICCAECKCVPSGTYGNKLECPCYRDKKNSKGK 84

Query: 100 RKCP 103
            KCP
Sbjct: 85  SKCP 88


>29970.m001021 conserved hypothetical protein
          Length = 101

 Score = 52.8 bits (125), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 31/59 (52%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           C   C ARC  +   + C + CG CCA CKCVP GT GN   CPCY       G  KCP
Sbjct: 43  CELKCGARCANAGYKDRCMKYCGICCAECKCVPSGTYGNKSECPCYRDKKNSKGNPKCP 101


>29904.m002938 Gibberellin-regulated protein 4 precursor, putative
          Length = 79

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 30/59 (50%)

Query: 45  CGSACTARCQLSSRPNLCKRACGTCCARCKCVPPGTAGNYEACPCYASLTTHGGRRKCP 103
           C  AC  RC  +     C   C  CC +C CVP GT G+ E CPCY +  T  G  KCP
Sbjct: 21  CPKACDFRCSATHHRGNCIDLCNKCCEKCLCVPSGTYGHKEECPCYNNWKTKEGTPKCP 79