Jatropha Genome Database

JcCA0254131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0254131.10 + phase: 0 /pseudo/partial
         (136 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29851.m002399 allantoinase, putative                                  114   1e-26

>29851.m002399 allantoinase, putative
          Length = 500

 Score =  114 bits (285), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/66 (80%), Positives = 58/66 (87%)

Query: 71  DIVIWEPSTVFDLNNDLPIYFKHPSISAYMGTKLSGKVLATFVRGNLVYKEGKHASAACG 130
           DIVIW+P+  FDL++DLPIY KH SISAY GTKLSGKVLATFVRGNLVY+EGKHA  ACG
Sbjct: 435 DIVIWDPNAEFDLSDDLPIYIKHSSISAYKGTKLSGKVLATFVRGNLVYREGKHAPTACG 494

Query: 131 SLILAK 136
           S ILAK
Sbjct: 495 SPILAK 500