Jatropha Genome Database

JcCA0251901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0251901.10 + phase: 0 
         (387 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29613.m000358 omega-6 desaturase, endoplasmic reticulum               583   e-167
28035.m000362 oleate 12-hydroxylase                                   576   e-165
29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor    201   7e-52
29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticul...   196   2e-50
28176.m000273 Omega-3 fatty acid desaturase, chloroplast precurs...   194   5e-50
29696.m000105 Omega-6 fatty acid desaturase, chloroplast precurs...    88   6e-18

>29613.m000358 omega-6 desaturase, endoplasmic reticulum
          Length = 383

 Score =  583 bits (1504), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 274/387 (70%), Positives = 316/387 (81%), Gaps = 4/387 (1%)

Query: 1   MGAGGQKTAVLVSSKFKEMETNRRLKRVPHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXX 60
           MGAGG+ +   V    K++E++  LKR P +KPPFTLGQIK+AIP HCFKRS+ R     
Sbjct: 1   MGAGGRMS---VPPPSKKVESDD-LKRAPSSKPPFTLGQIKKAIPPHCFKRSIPRSFSYV 56

Query: 61  XXXXXXXXXXXXIAASYFHLLPSPISYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQ 120
                       +A +YFHLLP P+SY+AWPIYW LQGC LTGVWVIAHECGHHAFSDYQ
Sbjct: 57  VYDLTIAFLFYYVATNYFHLLPEPLSYVAWPIYWALQGCVLTGVWVIAHECGHHAFSDYQ 116

Query: 121 WVDDTVGLILHSSLLVPYFSWKISHRRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPL 180
            +DD VGLILHS LLVPYFSWK SHRRHHSNTGS+ERDEVFVPK KS I WYS+YLNNP 
Sbjct: 117 LLDDVVGLILHSCLLVPYFSWKHSHRRHHSNTGSLERDEVFVPKKKSSIRWYSKYLNNPP 176

Query: 181 GRXXXXXXXXXVGWPLYLAFNVSGRPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAAT 240
           GR         +GWPLYLAFNVSGRPY+RFACH+DP GPIY+DRER++I+ISD G+ A T
Sbjct: 177 GRIMTIAVTLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYNDRERIEIFISDAGVLAVT 236

Query: 241 YVLYQIAMAKGLAWLISIYGIPLLIVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALST 300
           + LYQ+A+AKGLAW++ +YG+PLL+VN+FLV IT+LQHTHPALPHYDSSEWDWLRGAL+T
Sbjct: 237 FGLYQLAIAKGLAWVVCVYGVPLLVVNSFLVLITFLQHTHPALPHYDSSEWDWLRGALAT 296

Query: 301 VDRDYGVLNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPILMALW 360
           VDRDYG+LNKVFHNITDTHV HHLFSTMPHYHAMEATKAIKPILGEYYQFDGT    A+W
Sbjct: 297 VDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTSFYKAMW 356

Query: 361 REAKECLFVEPEEGGPNRGVLWYGNKY 387
           REAKEC++VE ++   N GV WY NK+
Sbjct: 357 REAKECIYVEKDDAEQNGGVFWYNNKF 383


>28035.m000362 oleate 12-hydroxylase
          Length = 387

 Score =  576 bits (1485), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 266/387 (68%), Positives = 310/387 (80%)

Query: 1   MGAGGQKTAVLVSSKFKEMETNRRLKRVPHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXX 60
           MG GG+ + V+ S+  ++   +  LKR PHTKPPFTLG +K+AIP HCF+RS +R     
Sbjct: 1   MGGGGRMSTVITSNNSEKKGGSSHLKRAPHTKPPFTLGDLKRAIPPHCFERSFVRSFSYV 60

Query: 61  XXXXXXXXXXXXIAASYFHLLPSPISYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQ 120
                       IA ++F  + SP+SY+AW +YW  QGC LTG+WVI HECGHHAFS+YQ
Sbjct: 61  AYDVCLSFLFYSIATNFFPYISSPLSYVAWLVYWLFQGCILTGLWVIGHECGHHAFSEYQ 120

Query: 121 WVDDTVGLILHSSLLVPYFSWKISHRRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPL 180
             DD VGLI+HS+LLVPYFSWK SHRRHHSN GS+ERDEVFVPK KS+I WYS+YLNNP 
Sbjct: 121 LADDIVGLIVHSALLVPYFSWKYSHRRHHSNIGSLERDEVFVPKSKSKISWYSKYLNNPP 180

Query: 181 GRXXXXXXXXXVGWPLYLAFNVSGRPYNRFACHFDPSGPIYSDRERLQIYISDIGIFAAT 240
           GR         +GWPLYLAFNVSGRPY+RFACH+DP GPI+S+RERLQIYI+D+GIFA T
Sbjct: 181 GRVLTLAATLLLGWPLYLAFNVSGRPYDRFACHYDPYGPIFSERERLQIYIADLGIFATT 240

Query: 241 YVLYQIAMAKGLAWLISIYGIPLLIVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALST 300
           +VLYQ  MAKGLAW++ IYG+PLLIVN FLV ITYLQHTHPA+P Y SSEWDWLRGA+ T
Sbjct: 241 FVLYQATMAKGLAWVMRIYGVPLLIVNCFLVMITYLQHTHPAIPRYGSSEWDWLRGAMVT 300

Query: 301 VDRDYGVLNKVFHNITDTHVTHHLFSTMPHYHAMEATKAIKPILGEYYQFDGTPILMALW 360
           VDRDYGVLNKVFHNI DTHV HHLF+T+PHYHAMEATKAIKPI+GEYY++DGTP   ALW
Sbjct: 301 VDRDYGVLNKVFHNIADTHVAHHLFATVPHYHAMEATKAIKPIMGEYYRYDGTPFYKALW 360

Query: 361 REAKECLFVEPEEGGPNRGVLWYGNKY 387
           REAKECLFVEP+EG P +GV WY NKY
Sbjct: 361 REAKECLFVEPDEGAPTQGVFWYRNKY 387


>29814.m000719 Omega-3 fatty acid desaturase, chloroplast precursor
          Length = 460

 Score =  201 bits (510), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/319 (36%), Positives = 170/319 (53%), Gaps = 18/319 (5%)

Query: 33  PPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXXXXXXXXXXIAASYFHLLPSPISYIAWPI 92
           PPFTL  I+ AIP HC+ ++  R                 +AA YF+      +++AWP+
Sbjct: 108 PPFTLADIRAAIPKHCWVKNPWRSMSYVLRDVVVVFGLAAVAA-YFN------NWVAWPL 160

Query: 93  YWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKISHRRHHSNT 152
           YW  QG     ++V+ H+CGH +FS+   ++  VG +LHSS+LVPY  W+ISHR HH N 
Sbjct: 161 YWFCQGTMFWALFVLGHDCGHGSFSNNPKLNSVVGHLLHSSILVPYHGWRISHRTHHQNH 220

Query: 153 GSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXXXXVGWPLYLAFNVSGRPYNRFAC 212
           G +E DE + P    +I    + L+N             + +P YL     G+       
Sbjct: 221 GHVENDESWHP-LSEKI---FKSLDNVTKTLRFSLPFPMLAYPFYLWSRSPGKK----GS 272

Query: 213 HFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAKGLAWLISIYGIPLLIVNAFLVT 272
           HF P   ++  +ER  I  S     A   +L  +  + G   ++ +YGIP  I   +L  
Sbjct: 273 HFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKLYGIPYWIFVMWLDF 332

Query: 273 ITYLQH--THPALPHYDSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVTHHLFSTMPH 330
           +TYL H      LP Y    W +LRG L+T+DRDYG +N + H+I  THV HHLF  +PH
Sbjct: 333 VTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHHLFPQIPH 391

Query: 331 YHAMEATKAIKPILGEYYQ 349
           YH +EAT+A KP++G+YY+
Sbjct: 392 YHLVEATEAAKPVMGKYYR 410


>29681.m001360 Omega-3 fatty acid desaturase, endoplasmic reticulum,
           putative
          Length = 506

 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 171/323 (52%), Gaps = 18/323 (5%)

Query: 29  PHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXXXXXXXXXXIAASYFHLLPSPISYI 88
           P   PPF + +I+ AIP HC+ ++  R                  A           S+ 
Sbjct: 80  PSDPPPFKIAEIRAAIPKHCWIKNPWRSLSYVLRDAFVVLALAAAALFL-------DSWC 132

Query: 89  AWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKISHRRH 148
            WP+YW  QG     ++V+ H+CGH +FSD   +++ VG +LHSS+LVPY  W+ISHR H
Sbjct: 133 FWPLYWAAQGTMFWAIFVLGHDCGHGSFSDSTLLNNVVGHLLHSSILVPYHGWRISHRTH 192

Query: 149 HSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXXXXVGWPLYLAFNVSGRPYN 208
           H N G++++DE +VP    +I + S  ++  + R         + +P+YL     G+   
Sbjct: 193 HQNHGNVDKDESWVP-LPEKI-YNSLDVSTRIMR--FTVPLPLLAYPIYLWTRGPGKD-- 246

Query: 209 RFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAKGLAWLISIYGIPLLIVNA 268
               HF P   +++  ER  +  S +       +L       G   ++ +YG+P +I   
Sbjct: 247 --GSHFSPYSDLFAPNERRAVLTSTVCWILMILLLLYSCFVFGSVQVLKLYGVPYIIFIM 304

Query: 269 FLVTITYLQH--THPALPHYDSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVTHHLFS 326
           +L  +TYL H      LP Y   EW +LRG L+TVDRDYG +N + H+I  THV HHLF 
Sbjct: 305 WLDFVTYLHHHGHEQKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDI-GTHVIHHLFP 363

Query: 327 TMPHYHAMEATKAIKPILGEYYQ 349
            +PHYH +EATKA KP+LG+YY+
Sbjct: 364 QIPHYHLVEATKAAKPVLGKYYR 386


>28176.m000273 Omega-3 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 452

 Score =  194 bits (493), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 168/326 (51%), Gaps = 24/326 (7%)

Query: 29  PHTKPPFTLGQIKQAIPSHCFKRSLLRXXXXXXXXXXXXXXXXXIAASYFHLLPSPI--- 85
           P   PPF L  I+ AIP HC+ ++  R                   A  F L  +     
Sbjct: 99  PGAPPPFKLSDIRAAIPKHCWIKNSWRSMSYVVRD----------VAVVFGLAAAAAYLN 148

Query: 86  SYIAWPIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKISH 145
           +++ WP+YW  QG     ++V+ H+CGH +FS+   ++  VG +LHSS+LVPY  W+ISH
Sbjct: 149 NWVVWPLYWAAQGTMFWALFVLGHDCGHGSFSNNNKLNSVVGHLLHSSILVPYHGWRISH 208

Query: 146 RRHHSNTGSIERDEVFVPKFKSRIPWYSQYLNNPLGRXXXXXXXXXVGWPLYLAFNVSGR 205
           R HH N G +E DE + P    +I    + L+              + +P YL     G+
Sbjct: 209 RTHHQNHGHVENDESWHP-LSEKI---FRNLDGITRTLRFSLPFPMLAYPFYLWSRSPGK 264

Query: 206 PYNRFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAKGLAWLISIYGIPLLI 265
                  HF P   ++   ER  +  S +   A   +L  ++   G   L+ +YGIP  +
Sbjct: 265 T----GSHFHPDSDLFVKNERKDVITSTVCWTAMVALLVGLSFVMGPIQLLKLYGIPYWV 320

Query: 266 VNAFLVTITYLQH--THPALPHYDSSEWDWLRGALSTVDRDYGVLNKVFHNITDTHVTHH 323
              +L ++TY+ H      LP Y   EW +LRG L+T+DRDYG +N + H+I  THV HH
Sbjct: 321 FVMWLDSVTYMHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDI-GTHVIHH 379

Query: 324 LFSTMPHYHAMEATKAIKPILGEYYQ 349
           LF  +PHYH +EAT+A KP+LG+YY+
Sbjct: 380 LFPQIPHYHLIEATEAAKPVLGKYYR 405


>29696.m000105 Omega-6 fatty acid desaturase, chloroplast precursor,
           putative
          Length = 440

 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 114/264 (43%), Gaps = 32/264 (12%)

Query: 91  PIYWTLQGCTLTGVWVIAHECGHHAFSDYQWVDDTVGLILHSSLLVPYFSWKISHRRHHS 150
           P+ W   G  +TG +VI H+C H +FS  + V+D VG +    L+ PY  W+  H RHH+
Sbjct: 150 PLAWAWTGTAITGFFVIGHDCAHKSFSKNKLVEDIVGTLAFMPLIYPYEPWRFKHDRHHA 209

Query: 151 NTGSIERDE----VFVPKFKSRIPWYS-QYLNNPLGRXXXXXXXXXVGWPLYLAFNVSGR 205
            T    R         P       W S   LN P              W ++        
Sbjct: 210 KTNMCVRHSFSLYFLCPNPNCATSWESPSILNMPW--------MSIAHWLIW-------- 253

Query: 206 PYNRFACHFDPSGPIYSDRERLQIYISDIGIFAATYVLYQIAMAK-GLAWLISIYGIPLL 264
                  HFD     +   E  ++ IS   +FA   + + + + K G+   I  + +P L
Sbjct: 254 -------HFDIKK--FRPNEVKRVKISLACVFAFMAIGWPLIVYKTGIMGWIKFWLMPWL 304

Query: 265 IVNAFLVTITYLQHTHPALPHYDSSEWDWLRGALS-TVDRDYGVLNKVFHNITDTHVTHH 323
             + ++ T T + HT P +P   S EW+  +  L+ TV  DY    ++  +  + H+ HH
Sbjct: 305 GYHFWMSTFTMVHHTAPHIPFKSSDEWNAAQAQLNGTVHCDYPRWIEILCHNINVHIPHH 364

Query: 324 LFSTMPHYHAMEATKAIKPILGEY 347
           + S +P Y+  EA  +I+   G+Y
Sbjct: 365 ISSRIPSYNLPEAHISIQEKWGKY 388