Jatropha Genome Database

JcCA0251011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0251011.10 - phase: 0 
         (68 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30138.m003939 mads box protein, putative                              116   2e-27
30174.m008934 mads box protein, putative                              102   5e-23
30147.m014133 mads box protein, putative                               91   8e-20
30221.m002218 mads box protein, putative                               90   2e-19
29648.m001978 mads box protein, putative                               89   5e-19
29907.m000663 mads box protein, putative                               89   6e-19
29596.m000699 mads box protein, putative                               86   5e-18
29838.m001690 mads box protein, putative                               85   7e-18
29908.m005982 mads box protein, putative                               84   1e-17
29804.m001536 mads box protein, putative                               84   2e-17
30170.m013776 mads box protein, putative                               83   3e-17
29782.m000119 Floral homeotic protein DEFICIENS, putative              79   4e-16
30138.m004061 mads box protein, putative                               72   7e-14
29693.m002039 mads box protein, putative                               70   2e-13
29693.m002042 mads box protein, putative                               68   9e-13
27866.m000233 mads box protein, putative                               67   2e-12
30099.m001672 mads box protein, putative                               67   2e-12
29613.m000367 mads box protein, putative                               65   9e-12
29693.m002041 mads box protein, putative                               64   1e-11
28348.m000077 mads box protein, putative                               64   1e-11
29813.m001508 mads box protein, putative                               63   3e-11
29838.m001672 mads box protein, putative                               63   3e-11
28830.m000229 mads box protein, putative                               63   3e-11
30099.m001671 mads box protein, putative                               63   4e-11
29912.m005524 mads box protein, putative                               59   6e-10
29739.m003627 mads box protein, putative                               56   4e-09
30190.m010925 conserved hypothetical protein                           52   6e-08
29653.m000299 mads box protein, putative                               49   4e-07
27893.m000228 mads box protein, putative                               49   6e-07
28180.m000391 mads box protein, putative                               47   2e-06

>30138.m003939 mads box protein, putative
          Length = 244

 Score =  116 bits (291), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/61 (98%), Positives = 61/61 (100%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRGRVQLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
Sbjct: 1  MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>30174.m008934 mads box protein, putative
          Length = 244

 Score =  102 bits (253), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/57 (84%), Positives = 57/57 (100%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          MGRGRV+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+
Sbjct: 1  MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEF 57


>30147.m014133 mads box protein, putative
          Length = 213

 Score = 91.3 bits (225), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 40/60 (66%), Positives = 55/60 (91%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          M RG++Q++RIEN  +RQVTFSKRR+GLLKKA+E+SVLCDAEVA+I+FS KG+L E++++
Sbjct: 1  MVRGKIQMRRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLSEFASN 60


>30221.m002218 mads box protein, putative
          Length = 233

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/60 (65%), Positives = 52/60 (86%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRG++ +KRIEN+  RQVTFSKRR+GLLKK HE+SVLCDA++ LI+FS+ GK+ +Y T+
Sbjct: 1  MGRGKIPIKRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCTE 60


>29648.m001978 mads box protein, putative
          Length = 234

 Score = 88.6 bits (218), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/61 (65%), Positives = 54/61 (88%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRGR+++KRIEN  NRQVT+SKRR+G++KKA EI+VLCDAEV+LI+F++ GK+ EY + 
Sbjct: 1  MGRGRIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAEVSLIIFASSGKMHEYCSP 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>29907.m000663 mads box protein, putative
          Length = 205

 Score = 88.6 bits (218), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/59 (67%), Positives = 50/59 (84%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
          M RG+VQ+KRIEN ++RQVTF KRRSGLLKKA E+SVLCDAE+ L +FS  GKL++ +T
Sbjct: 1  MARGKVQMKRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGLFIFSAHGKLYDLAT 59


>29596.m000699 mads box protein, putative
          Length = 262

 Score = 85.5 bits (210), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/61 (59%), Positives = 54/61 (88%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRG++ ++RI+N  +RQVTFSKRR+GLLKKA E+++LCDAEV +++FS+ GKL+++S+ 
Sbjct: 1  MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTGKLYDFSSS 60

Query: 61 S 61
          S
Sbjct: 61 S 61


>29838.m001690 mads box protein, putative
          Length = 61

 Score = 85.1 bits (209), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 49/59 (83%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
          M R ++Q+K+I+N   RQVTFSKRR GL KKA+E+S LCDAE+AL+VFS  GKLFEY++
Sbjct: 1  MTRQKIQIKKIDNITARQVTFSKRRRGLFKKAYELSTLCDAEIALLVFSATGKLFEYAS 59


>29908.m005982 mads box protein, putative
          Length = 347

 Score = 84.3 bits (207), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 50/58 (86%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS 58
          MGR ++++KRIEN  NRQVTFSKRR+GL+KKA+E+S+LCD ++ALI+FS  G+L  +S
Sbjct: 1  MGRVKLEIKRIENTTNRQVTFSKRRNGLIKKAYELSILCDIDIALIMFSPSGRLSHFS 58


>29804.m001536 mads box protein, putative
          Length = 266

 Score = 83.6 bits (205), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/61 (60%), Positives = 53/61 (86%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRG++ ++RI+N  +RQVTFSKRR+GLLKKA E+S+LCDAEV +I+FS+  KL++Y++ 
Sbjct: 28 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKARELSILCDAEVGVIIFSSTSKLYDYAST 87

Query: 61 S 61
          S
Sbjct: 88 S 88


>30170.m013776 mads box protein, putative
          Length = 230

 Score = 82.8 bits (203), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/58 (67%), Positives = 50/58 (86%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYS 58
          MGR ++Q+KRIEN  NRQVTFSKRR+GL+KKA+E+SVLCD +VALI+FS  G+L  +S
Sbjct: 1  MGRVKLQIKRIENTTNRQVTFSKRRNGLIKKAYELSVLCDVDVALIMFSPSGRLSLFS 58


>29782.m000119 Floral homeotic protein DEFICIENS, putative
          Length = 235

 Score = 79.0 bits (193), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/55 (61%), Positives = 48/55 (87%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLF 55
          MGRG++++K+IEN  NRQVT+SKRR+G+ KKA E++VLCDA+V+LI+FS  G+ F
Sbjct: 1  MGRGKIEIKKIENPTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSNSGRKF 55


>30138.m004061 mads box protein, putative
          Length = 363

 Score = 71.6 bits (174), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/53 (56%), Positives = 44/53 (83%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGK 53
          MGR ++++KR+E+  NRQVT+SKRR+G+LKKA E+S+LCD  + L++FS  GK
Sbjct: 1  MGRVKLKIKRLESTSNRQVTYSKRRNGILKKAKELSILCDIHIVLLMFSPTGK 53


>29693.m002039 mads box protein, putative
          Length = 172

 Score = 70.1 bits (170), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 46/57 (80%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          MGR ++++K +++  +RQVTFSKRR+GL KKA+E++ LC A++A++VFS  GK F +
Sbjct: 1  MGRRKIEMKMVKDTSSRQVTFSKRRTGLFKKANELATLCAAQIAIVVFSPGGKPFSF 57


>29693.m002042 mads box protein, putative
          Length = 220

 Score = 67.8 bits (164), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/60 (53%), Positives = 43/60 (71%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS 61
          GR ++ +KRIEN+ +R +TFSKRRSG+ KKA E+  LC AEV ++VFS  GK F +   S
Sbjct: 9  GRQKITMKRIENEEDRLITFSKRRSGIYKKASELITLCGAEVGILVFSPAGKPFSFGHPS 68


>27866.m000233 mads box protein, putative
          Length = 217

 Score = 67.0 bits (162), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 43/56 (76%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          GR ++++K IE K N QVTFSKRR+GL KKA E+S+LC A+VA++ FS   K+F +
Sbjct: 13 GRQKIEIKPIEGKSNLQVTFSKRRAGLFKKASELSLLCGAQVAVLAFSPGKKVFAF 68


>30099.m001672 mads box protein, putative
          Length = 217

 Score = 66.6 bits (161), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/56 (55%), Positives = 42/56 (75%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          GR ++ + ++ N+ N QVTFSKRRSGL KKA E+S LC AE+A+IVFS   K+F +
Sbjct: 7  GRQKIDMVKMPNESNLQVTFSKRRSGLFKKASELSTLCGAEIAIIVFSPGKKVFSF 62


>29613.m000367 mads box protein, putative
          Length = 183

 Score = 64.7 bits (156), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 41/57 (71%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          +GR ++ +++I  K + QVTFSKRR+GL KKA E+  LC  E+A+IVFS  GK F +
Sbjct: 6  LGRQKIAIEKISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPAGKAFSF 62


>29693.m002041 mads box protein, putative
          Length = 239

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/60 (48%), Positives = 44/60 (73%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS 61
          GR ++++K+IEN+ +R +TFSKRRSG+ KKA E+  L  AE+A +V+S  GK F ++  S
Sbjct: 12 GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLTGAELAFLVYSPAGKPFSFAHPS 71


>28348.m000077 mads box protein, putative
          Length = 215

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 42/54 (77%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLF 55
          GR ++++K++EN   R VTFSKR+ G+ KKA E+S LC AE+A+++FS  GK+F
Sbjct: 17 GRQKIEIKKLENVNRRYVTFSKRKHGIFKKATELSTLCGAEIAVVLFSGHGKVF 70


>29813.m001508 mads box protein, putative
          Length = 360

 Score = 63.2 bits (152), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/53 (47%), Positives = 41/53 (77%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGK 53
          MGR ++++K++EN   RQ T+ KR+ G++KKA E+S+LCD ++ L++FS  GK
Sbjct: 1  MGRVKLKIKKLENTNGRQATYGKRKHGIIKKAKELSILCDIDIILLMFSPTGK 53


>29838.m001672 mads box protein, putative
          Length = 207

 Score = 62.8 bits (151), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%)

Query: 2  GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS 61
          GR R+++ +I  + NR VTFSKRR G+ KKA E+S LC AE+++IVFS   + F +   S
Sbjct: 8  GRQRIEMVKISKESNRLVTFSKRRYGVFKKASELSTLCGAEISIIVFSPGKRAFSFGNPS 67


>28830.m000229 mads box protein, putative
          Length = 197

 Score = 62.8 bits (151), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          MGR + Q+  I+ +  RQV+FSKRR+G+ KKA E+  LC  E A+++FS  GK F +
Sbjct: 1  MGRKKTQMSLIQGESARQVSFSKRRTGIFKKASELCTLCAVEAAVVIFSPGGKAFTF 57


>30099.m001671 mads box protein, putative
          Length = 226

 Score = 62.8 bits (151), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/57 (47%), Positives = 40/57 (70%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          +GR ++ +++I  K + QVTFSKRR+GL KKA E+  LC  E+A++VFS   K F +
Sbjct: 26 LGRQKIAIEKISKKTHLQVTFSKRRAGLFKKASELCTLCGVEIAILVFSPANKAFSF 82


>29912.m005524 mads box protein, putative
          Length = 338

 Score = 58.5 bits (140), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD 60
          MGRG++ ++ I N+ +R +T+ KR+ GL KK  E  +LCD +  +I+FS K     +  +
Sbjct: 1  MGRGKLNMELISNEKSRMITYHKRKKGLTKKVQEFHILCDVDACIIIFSPKFNNRSFDIE 60

Query: 61 SW 62
          +W
Sbjct: 61 TW 62


>29739.m003627 mads box protein, putative
          Length = 62

 Score = 55.8 bits (133), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 40/57 (70%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY 57
          MGR ++++ R+E+   RQV +SKR+ G+LKK  E++ LCD ++ LI+FS  GK   Y
Sbjct: 1  MGRRKLKILRLESVKARQVKYSKRKLGVLKKGKELATLCDVDLGLIMFSPSGKPSLY 57


>30190.m010925 conserved hypothetical protein
          Length = 386

 Score = 52.0 bits (123), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 34/53 (64%)

Query: 1  MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGK 53
          MG  R++++ IE +  R +T+ KR+  L+KK  E S+LC  E  LI+F+ K K
Sbjct: 1  MGHSRIKMELIEKESTRMLTYQKRKKSLVKKVSEFSILCGVEACLIIFAPKHK 53


>29653.m000299 mads box protein, putative
          Length = 166

 Score = 48.9 bits (115), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 5  RVQLKRIE-NKINRQVTFSKRRSGLLKKAHEISVL--CDAEVALIVFSTKGKLFEYSTDS 61
          ++++K+I+ NK    VTFSKRR+GL KKA E   L    AEVALI FS  G+ F +   S
Sbjct: 29 KIEIKKIQDNKTGLIVTFSKRRTGLFKKAMEFCNLDGGGAEVALITFSPSGRPFSFGKPS 88


>27893.m000228 mads box protein, putative
          Length = 349

 Score = 48.5 bits (114), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/46 (45%), Positives = 35/46 (76%)

Query: 8  LKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGK 53
          +K++E++  R V+F+KRR+GL  KA E+ +LCDA++A++V S   K
Sbjct: 9  MKKLESQKQRSVSFTKRRNGLFNKAAELFMLCDAQLAVLVASPCSK 54


>28180.m000391 mads box protein, putative
          Length = 328

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 5  RVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFST 50
          ++ +K+ E K  R V+F+KRR GL  KA E+ +LCDA++AL+V S 
Sbjct: 6  KLPMKKRETKKQRSVSFTKRRYGLFNKAAELFMLCDAQLALLVSSP 51