Jatropha Genome Database

JcCA0246001.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0246001.10 + phase: 1 /pseudo/partial
         (101 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000406 adenylosuccinate lyase, putative                         91   9e-20

>29610.m000406 adenylosuccinate lyase, putative
          Length = 473

 Score = 91.3 bits (225), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/46 (89%), Positives = 45/46 (97%)

Query: 49 MAARDFELSSLTALSPLDGRYWGKVKDLSPHMSEYGLIFYRVLVEV 94
          MAARDFELS+LTALSPLDGRYW KVKDLSP+MSE+GLI+YRVLVEV
Sbjct: 1  MAARDFELSNLTALSPLDGRYWSKVKDLSPYMSEFGLIYYRVLVEV 46