Jatropha Genome Database

JcCA0245241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0245241.10 + phase: 0 /partial
         (249 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014305 dihydrodipicolinate reductase, putative                 464   e-131

>30147.m014305 dihydrodipicolinate reductase, putative
          Length = 300

 Score =  464 bits (1195), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/249 (89%), Positives = 237/249 (95%)

Query: 1   MAALSCYFQFTINRSSQKVKSKPFIYCSTQPVQSNIKVVVNGAAKEIGRAAVIAVSKARG 60
           MAALSC+ QFT+++    VK+KPFI+CS QP +SNIKVVVNGAAKEIGRAAVIAV+KARG
Sbjct: 1   MAALSCHLQFTVSKGCSNVKAKPFIFCSAQPAKSNIKVVVNGAAKEIGRAAVIAVTKARG 60

Query: 61  MEVAGAVDTHFVGEDIGKLCDMEEPLEIPIINDLTMVLGSISQSKETGVVIDFTDPSTVY 120
           MEVAGAVDTHFVGED+G LCDMEEPLEIP+INDLTMVLGSISQSKETGVVIDFTDPSTVY
Sbjct: 61  MEVAGAVDTHFVGEDVGLLCDMEEPLEIPVINDLTMVLGSISQSKETGVVIDFTDPSTVY 120

Query: 121 DNVKQATAFGMKSIVYVPRIKLDTIAALSALCDKASMGCLVAPTLSIGSILLQQAAISAS 180
           DNVKQATAFGMKSIVYVPRIK+DTIAALSALC+KASMGCLVAPTLSIGSILLQQAAISAS
Sbjct: 121 DNVKQATAFGMKSIVYVPRIKVDTIAALSALCEKASMGCLVAPTLSIGSILLQQAAISAS 180

Query: 181 FHYNNVEIVESRAQAADLPSADAFQIAKNLSNLGQIYNREDSSTDVLARGQVLGEDGVRV 240
           FHYNNVEIVESRA  ADLPSADA QIAKNLSNLGQIYN+ED STDVLARGQVLGEDGVRV
Sbjct: 181 FHYNNVEIVESRAHGADLPSADANQIAKNLSNLGQIYNKEDLSTDVLARGQVLGEDGVRV 240

Query: 241 HSLVLPGLP 249
           HSLVLPGLP
Sbjct: 241 HSLVLPGLP 249