Jatropha Genome Database

JcCA0242131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0242131.10 + phase: 1 /TE/partial
         (474 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27401.m000290 H(\+)-transporting atpase plant/fungi plasma membr...   209   2e-54
30174.m008765 H(\+)-transporting atpase plant/fungi plasma membr...   204   6e-53
30182.m000136 H(\+)-transporting atpase plant/fungi plasma membr...   197   9e-51
29884.m000180 H(\+)-transporting atpase plant/fungi plasma membr...   182   3e-46
29822.m003460 H(\+)-transporting atpase plant/fungi plasma membr...   112   5e-25
30147.m014059 H(\+)-transporting atpase plant/fungi plasma membr...   108   8e-24
29737.m001242 H(\+)-transporting atpase plant/fungi plasma membr...    89   6e-18
29588.m000874 H(\+)-transporting atpase plant/fungi plasma membr...    68   1e-11
29848.m004445 H(\+)-transporting atpase plant/fungi plasma membr...    67   2e-11

>27401.m000290 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 839

 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 117/184 (63%), Positives = 126/184 (68%), Gaps = 54/184 (29%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           +SALTGESLPVTK PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVE+T+HVGHFQ
Sbjct: 137 KSALTGESLPVTKCPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVESTTHVGHFQ 196

Query: 238 KVFFVSPPMIIRLKEMKIFVSCITYKNVMTKLSVVXKXNYCDVTSLLIKFIXWFQVLTSI 297
           K                          V+T +      N+C                   
Sbjct: 197 K--------------------------VLTAIG-----NFC------------------- 206

Query: 298 GNFCICSIALGMLVEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 357
               ICSIA+GM+VEIIVIYGIQ+R YRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 207 ----ICSIAIGMVVEIIVIYGIQKREYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 262

Query: 358 LSQQ 361
           LSQQ
Sbjct: 263 LSQQ 266


>30174.m008765 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 874

 Score =  204 bits (520), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/185 (66%), Positives = 129/185 (69%), Gaps = 54/185 (29%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENT+HVGHFQ
Sbjct: 182 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQ 241

Query: 238 KVFFVSPPMIIRLKEMKIFVSCITYKNVMTKLSVVXKXNYCDVTSLLIKFIXWFQVLTSI 297
           K                          V+T +      N+C                   
Sbjct: 242 K--------------------------VLTAIG-----NFC------------------- 251

Query: 298 GNFCICSIALGMLVEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 357
               ICSIALGM++EIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR
Sbjct: 252 ----ICSIALGMIIEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307

Query: 358 LSQQV 362
           LSQQV
Sbjct: 308 LSQQV 312


>30182.m000136 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 952

 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 111/184 (60%), Positives = 123/184 (66%), Gaps = 54/184 (29%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           QSALTGESLPVTKNPGD V+SGSTCKQGEIEAVVIATGVHTFFGKAAHLV++T++VGHFQ
Sbjct: 181 QSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQ 240

Query: 238 KVFFVSPPMIIRLKEMKIFVSCITYKNVMTKLSVVXKXNYCDVTSLLIKFIXWFQVLTSI 297
           K                          V+T +      N+C                   
Sbjct: 241 K--------------------------VLTAIG-----NFC------------------- 250

Query: 298 GNFCICSIALGMLVEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 357
               ICSIA+GMLVEIIV+Y IQ R YR GI+NLLVLLIGGIPIAMPTVLSVTMAIGSH+
Sbjct: 251 ----ICSIAIGMLVEIIVMYPIQHRKYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHK 306

Query: 358 LSQQ 361
           LSQQ
Sbjct: 307 LSQQ 310


>29884.m000180 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 739

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/184 (55%), Positives = 118/184 (64%), Gaps = 54/184 (29%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           QSALTGESLPVTK  GD V+SGSTCK GEIEAVVIATGV+TFFGKAAHLV++T  VGHFQ
Sbjct: 8   QSALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVNTFFGKAAHLVDSTEVVGHFQ 67

Query: 238 KVFFVSPPMIIRLKEMKIFVSCITYKNVMTKLSVVXKXNYCDVTSLLIKFIXWFQVLTSI 297
           K                          V+T +      N+C                   
Sbjct: 68  K--------------------------VLTAIG-----NFC------------------- 77

Query: 298 GNFCICSIALGMLVEIIVIYGIQERGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 357
               ICSIA+GM++EII++Y +Q R YR GI+NLLVLLIGGIPIAMPTVLSVT+AIGSHR
Sbjct: 78  ----ICSIAVGMVLEIIIMYPVQRRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHR 133

Query: 358 LSQQ 361
           LSQQ
Sbjct: 134 LSQQ 137


>29822.m003460 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 762

 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/62 (83%), Positives = 57/62 (91%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQ 237
           +SALTGESLPVTK PGD VYSGSTCKQGEI AVVIATGVHTFFGKAAHLV++T+ VGHFQ
Sbjct: 137 KSALTGESLPVTKGPGDSVYSGSTCKQGEIGAVVIATGVHTFFGKAAHLVDSTNQVGHFQ 196

Query: 238 KV 239
           + 
Sbjct: 197 QA 198


>30147.m014059 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 801

 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 53/66 (80%), Positives = 57/66 (86%), Gaps = 1/66 (1%)

Query: 178 QSALTGESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHV-GHF 236
           QSALTGESLPVTK PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV+ T+      
Sbjct: 182 QSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQARAGI 241

Query: 237 QKVFFV 242
           Q+V F+
Sbjct: 242 QEVHFL 247


>29737.m001242 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 747

 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 39/49 (79%), Positives = 46/49 (93%)

Query: 192 PGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQKVF 240
           P   ++SGSTCKQGEIEA+VIATGVHTFFGKAAHLV++T++VGHFQKVF
Sbjct: 132 PKTKIFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNNVGHFQKVF 180


>29588.m000874 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 733

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 202 CKQGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQKV 239
            KQGEIEA+VIATGVHTFFGKAAHLV++T+  GHFQK 
Sbjct: 136 TKQGEIEAIVIATGVHTFFGKAAHLVDSTNQEGHFQKA 173


>29848.m004445 H(\+)-transporting atpase plant/fungi plasma membrane
           type, putative
          Length = 734

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 34/36 (94%)

Query: 204 QGEIEAVVIATGVHTFFGKAAHLVENTSHVGHFQKV 239
           +GEIEAVVIATGVHTFFGKAAHLV++T+ VGHFQK 
Sbjct: 138 KGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKA 173