Jatropha Genome Database

JcCA0241461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0241461.10 + phase: 0 /partial
         (275 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005418 asparagine--tRNA ligase, putative                       285   2e-77
28708.m000178 aspartyl-tRNA synthetase, putative                      151   3e-37
29912.m005417 aspartyl-tRNA synthetase, putative                       79   3e-15

>29912.m005418 asparagine--tRNA ligase, putative
          Length = 155

 Score =  285 bits (728), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/150 (90%), Positives = 141/150 (94%)

Query: 1   MEDQQDATALKHPFSDRVPIRSIVNRPDGGTGLCGQRVRIGGWVKTGREQGKGSFAFLEL 60
           M DQ DA ALKHPFSDRVPIRSIV+RPDGG  L GQRVR+GGWVKTGREQGKGSFAFLEL
Sbjct: 1   MGDQNDAVALKHPFSDRVPIRSIVSRPDGGASLKGQRVRVGGWVKTGREQGKGSFAFLEL 60

Query: 61  NDGSCSANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLHVGPV 120
           NDG+C ANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKV+HVGPV
Sbjct: 61  NDGTCPANLQVIVEKEVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVIHVGPV 120

Query: 121 DPAKYPIPKTKLTLEFLRDRIHFRPRTNTI 150
           DPAKYPIPKTKLTLEFLRD IH RPRTNT+
Sbjct: 121 DPAKYPIPKTKLTLEFLRDHIHLRPRTNTV 150


>28708.m000178 aspartyl-tRNA synthetase, putative
          Length = 657

 Score =  151 bits (381), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 117/215 (54%), Gaps = 3/215 (1%)

Query: 58  LELNDGSCSANLQVIVEK-EVADLSPLVHTGACVSVEGVLKEPPEGTKQKIELRVEKVLH 116
           L ++DGSC A+LQV VE  E     PL   G C+  EG+L + P   K +I L VEK+LH
Sbjct: 163 LLVSDGSCVASLQVTVESSEALPFQPL-PIGTCILAEGILNQLPSQDKHRIGLEVEKILH 221

Query: 117 VGPVDPAKYPIPKTKLTLEFLRDRIHFRPRTNTISAVARIRNALAFATHSFFQEHGFLYV 176
           +G V+  KYP+ + ++ LE LR   HFRPRT T+++V RIR+AL FAT++FFQ+HGFL V
Sbjct: 222 IGKVEDDKYPLSRKRVPLETLRSCSHFRPRTTTVASVMRIRSALTFATYTFFQDHGFLSV 281

Query: 177 HTPIITTSDCEGAGEMFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQ 236
           H PIITT+D  G  E F+VTT              +       +EA K  ++E+    AQ
Sbjct: 282 HVPIITTTDGAGFSEKFRVTTLSGKEVQKAEAKISDDTEG-ISLEAIKAAIREKNNLAAQ 340

Query: 237 LXXXXXXXXXXXXXXXXLTTAKENVSRLVERSKLK 271
           L                L    +  S L  + KLK
Sbjct: 341 LKRSESNREALLAVEQDLRKTNQLASHLEAKEKLK 375


>29912.m005417 aspartyl-tRNA synthetase, putative
          Length = 364

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 48/84 (57%)

Query: 192 MFQVTTXXXXXXXXXXXXXQNPPPSEAEIEAAKLVVKERGEAVAQLXXXXXXXXXXXXXX 251
           MFQVTT             QNPPPSE +IEAAKLVV E+GEAV+QL              
Sbjct: 1   MFQVTTLISEIEKIEKDLIQNPPPSETDIEAAKLVVNEKGEAVSQLKSAKASKDNISASV 60

Query: 252 XXLTTAKENVSRLVERSKLKPGIP 275
             L  AKEN+ +L ER+KLKPG P
Sbjct: 61  AELKKAKENLLKLEERAKLKPGFP 84