Jatropha Genome Database

JcCA0240561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0240561.10 - phase: 1 /partial
         (416 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007071 bifunctional dihydrofolate reductase-thymidylate s...   676   0.0  
30170.m014082 bifunctional dihydrofolate reductase-thymidylate s...   570   e-163

>30131.m007071 bifunctional dihydrofolate reductase-thymidylate
           synthase, putative
          Length = 528

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/380 (85%), Positives = 348/380 (91%), Gaps = 3/380 (0%)

Query: 40  MAGDSKASLSNGTANI-QSDPRRTYQVVVAATRDMGIGKEGKLPWRLPSDLKFFKDVTLT 98
           MAGD+KA+LSNG ANI Q DPRRTYQVVVAATRDMGIGK+GKLPWRLPSDLKFFKDVTLT
Sbjct: 1   MAGDTKANLSNGNANIEQHDPRRTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTLT 60

Query: 99  TSDSGRKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGXXXXXXX 158
           T+DSG+KNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVV+CG       
Sbjct: 61  TTDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASALE 120

Query: 159 XXXXXPYCLSIEKVFIIGGGQILRESLNAPGCDAIHITEIETSIDCDTFIPKIDSSVFQP 218
                PYCLSIEKV++IGGGQILRE+LNAPGCDA+HITEIETS DCDTFIP IDSS+F P
Sbjct: 121 LLAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFHP 180

Query: 219 WYSSFPIVENNVRYCFATYVRVRVSAVESHGQDNGL--SSDNSYIKFEVKKFSFLPKMVF 276
           WY SFP+VENN+RY FATYVRVR SAVES+G D+GL   S +   KF+VKKFSFLPKMVF
Sbjct: 181 WYLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMVF 240

Query: 277 ERHEEFLYLRLVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRRTFPLLTTKKVFWRGVV 336
           +RHEEFLYLRLVQ+IISDG LKDDRTGTGTLSKFGCQ+RFNLR+TFPLLTTKKVFWRGVV
Sbjct: 241 DRHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVV 300

Query: 337 EELLWFISGSTNCKVLQEKGIHIWDGNASRDYLDGIGLKDREEGDLGPVYGFQWRHFGAR 396
           EELLWFISGSTN KVLQEKGIHIWDGNASRDYLD IGLK+REEGDLGPVYGFQWRHFGAR
Sbjct: 301 EELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGAR 360

Query: 397 YTDMHADYTGQGFDQLLDVI 416
           YTDMHADYTGQGFDQLLDV+
Sbjct: 361 YTDMHADYTGQGFDQLLDVV 380


>30170.m014082 bifunctional dihydrofolate reductase-thymidylate
           synthase, putative
          Length = 591

 Score =  570 bits (1470), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 284/432 (65%), Positives = 331/432 (76%), Gaps = 20/432 (4%)

Query: 1   FDFLIALLFQVLKNFCKS--W-----------VYTVSSEVPSSNFCLAFFSNMAGDSKAS 47
            DF  A+L +VL + CK+  W           +  VS E P         S M+GD    
Sbjct: 13  LDFDAAMLTRVLLSSCKNSFWNSSYLSVAVTRLQIVSCESPKWR-SYRRLSVMSGDVSIG 71

Query: 48  LSNGTANIQSDPRRTYQVVVAATRDMGIGKEGKLPWRLPSDLKFFKDVTLTTSDSGRKNA 107
           +  G AN+  D  R YQVVVAATRDMGIGK+GKLPWRLPSDLKFFK++TLTTS  G++NA
Sbjct: 72  IPRGNANMHLDRNRRYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKELTLTTSSPGKRNA 131

Query: 108 VIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGXXXXXXXXXXXXPYCL 167
           V+MGRKTWESIPL++RPLPGRLN+VLT SG  DI TAE+V+ CG            PY  
Sbjct: 132 VVMGRKTWESIPLKYRPLPGRLNIVLTCSGGCDITTAEDVLTCGSIPSALELLAEAPYSF 191

Query: 168 SIEKVFIIGGGQILRESLNAPGCDAIHITEIETSIDCDTFIPKIDSSVFQPWYSSFPIVE 227
            IEKVF IGGGQILR+++NAPGCDAIHITEIETSI+CDTFIP ID S+F PWYSS PIVE
Sbjct: 192 LIEKVFFIGGGQILRKTINAPGCDAIHITEIETSIECDTFIPVIDFSLFHPWYSSLPIVE 251

Query: 228 NNVRYCFATYVRVRVS---AVESHGQDNGLSSDNSYIKFEVKKFSFLPKMVFERHEEFLY 284
           NNVRY FATYVRV+ S    +      NG  S N+   FEVK F+FLP +++++H+E++Y
Sbjct: 252 NNVRYSFATYVRVKNSENGTLSKSASANGNLSSNT---FEVKNFTFLPSIIYKKHDEYMY 308

Query: 285 LRLVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRRTFPLLTTKKVFWRGVVEELLWFIS 344
           LRL + IIS+G LKDDRTGTGTLSKFG QM++NLR++FPLLTTK+VFW GVVEELLWFIS
Sbjct: 309 LRLAEQIISNGTLKDDRTGTGTLSKFGGQMQYNLRKSFPLLTTKRVFWMGVVEELLWFIS 368

Query: 345 GSTNCKVLQEKGIHIWDGNASRDYLDGIGLKDREEGDLGPVYGFQWRHFGARYTDMHADY 404
           GSTN KVLQEKGIHIWDGNASRDYLD IGLKD EE DLGP+YGFQWR+FGARYTDMHADY
Sbjct: 369 GSTNAKVLQEKGIHIWDGNASRDYLDSIGLKDIEESDLGPIYGFQWRYFGARYTDMHADY 428

Query: 405 TGQGFDQLLDVI 416
           +GQGFDQL+DVI
Sbjct: 429 SGQGFDQLVDVI 440