Jatropha Genome Database
- JcCA0229931.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0229931.10 - phase: 1 /partial
(599 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29827.m002528 Transcription factor AtMYC2, putative 669 0.0
29883.m002023 DNA binding protein, putative 111 1e-24
29742.m001404 DNA binding protein, putative 110 2e-24
27964.m000352 DNA binding protein, putative 108 6e-24
30068.m002581 DNA binding protein, putative 101 8e-22
27964.m000356 transcription factor, putative 91 2e-18
28124.m000246 MYC transcription factor, putative 83 3e-16
30174.m009029 transcription factor, putative 78 1e-14
29647.m002101 conserved hypothetical protein 75 1e-13
29804.m001498 DNA binding protein, putative 74 3e-13
28179.m000479 DNA binding protein, putative 73 4e-13
30147.m014419 Transcription factor ICE1, putative 72 6e-13
28179.m000478 DNA binding protein, putative 70 2e-12
30198.m000869 DNA binding protein, putative 69 6e-12
29869.m001189 hypothetical protein 65 8e-11
29646.m001078 conserved hypothetical protein 62 6e-10
30131.m006993 conserved hypothetical protein 60 2e-09
29706.m001347 hypothetical protein 59 6e-09
30174.m008814 DNA binding protein, putative 59 6e-09
30138.m004021 DNA binding protein, putative 59 8e-09
29869.m001185 hypothetical protein 58 1e-08
28567.m000052 Transcription factor ICE1, putative 57 2e-08
30076.m004542 hypothetical protein 57 3e-08
29869.m001184 transcription factor, putative 57 3e-08
29842.m003700 DNA binding protein, putative 56 5e-08
29631.m001025 hypothetical protein 56 5e-08
29908.m006255 DNA binding protein, putative 55 1e-07
30128.m008988 conserved hypothetical protein 55 1e-07
28179.m000457 DNA binding protein, putative 54 3e-07
29596.m000688 DNA binding protein, putative 54 3e-07
29814.m000735 hypothetical protein 52 5e-07
29737.m001209 conserved hypothetical protein 52 8e-07
30170.m013852 conserved hypothetical protein 52 1e-06
29739.m003684 DNA-directed RNA polymerase beta chain, putative 52 1e-06
29869.m001188 hypothetical protein 52 1e-06
27749.m000334 conserved hypothetical protein 50 2e-06
30115.m001235 conserved hypothetical protein 50 2e-06
30204.m001816 Phytochrome-interacting factor, putative 50 3e-06
>29827.m002528 Transcription factor AtMYC2, putative
Length = 663
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/549 (64%), Positives = 380/549 (69%), Gaps = 22/549 (4%)
Query: 56 MTDYRIASTMNLWTDDNSSVMEAFMNSDLSALWXXXXXXXXXXXXXXXXXXXN---KTVI 112
MTDYR+A TMNLW+DDN+SVMEAFMN+DLSALW + +I
Sbjct: 1 MTDYRVAPTMNLWSDDNASVMEAFMNTDLSALWQPQQSSAASTSTPPLPNSTDPNRAAII 60
Query: 113 NQSQ-PIFNQETLQQRLLTLIEGARESWTYAIFWQSSYDYNG-SVLGWXXXXXXXXXXXX 170
NQSQ P+FNQETLQQRL LIEGARESWTYAIFWQSSYDY+G SVLGW
Sbjct: 61 NQSQQPLFNQETLQQRLQALIEGARESWTYAIFWQSSYDYSGASVLGWGDGYYKGEEDKG 120
Query: 171 XXXXXXXXXXAVEQEHRKKVLRELNSLISGSNXXXXXXXXXXXXXXXWFFLVSMTQSFVN 230
EQEHRKKVLRELNSLISG WFFLVSMTQSFVN
Sbjct: 121 KGKSKSTSSSIAEQEHRKKVLRELNSLISGPTAITDDAVDEEVTDTEWFFLVSMTQSFVN 180
Query: 231 GGGLPGHAFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELI 290
GGGLPG AFFNGSPVWVAG +RL++S CERARQGQ+FGLQTLVCIPSANGVVELGSTELI
Sbjct: 181 GGGLPGQAFFNGSPVWVAGLERLASSSCERARQGQIFGLQTLVCIPSANGVVELGSTELI 240
Query: 291 YQSSDLMNKVRVLFNFNSVEVGSWPMGANPDQGENDTSSLWISDPSQSGIEMKDGXXXXX 350
YQS DLMNKVRVLFNFNS+E GSWPMGANPDQGEND SSLWISDPSQSGIE+KDG
Sbjct: 241 YQSIDLMNKVRVLFNFNSLEAGSWPMGANPDQGENDPSSLWISDPSQSGIEIKDG-NSTV 299
Query: 351 XXXXXXXXXXXXXXXXKGIPLGNPNSSSLTETPXXXXXXXXXXXXXXXXXXSFFTRELNF 410
KGI NPNSS +T+ P SFFTRELNF
Sbjct: 300 PSSGVGGVNNNSQHGSKGIQSVNPNSSCVTDNP--------SGTHMQNQQQSFFTRELNF 351
Query: 411 GDYSGFDGSSARNGNSNLLKPESGEILNFGESKRSSCSANGNFFSGHSQFTAEDXXXXXX 470
G+Y+GFDG RNGN+N+LKPESGEILNFGESKRSS SANGN F GHSQF E+
Sbjct: 352 GEYNGFDG---RNGNTNVLKPESGEILNFGESKRSSYSANGNLFPGHSQFATEE-----K 403
Query: 471 XXXXRSPTSRGSNEEGMLSFTSGVILPXXXXXXXXXXXXXXXXXXLEASVVRETDSSRVI 530
RSPTSRGSNEEGMLSFTSGV+LP LEASVVRET+SSRV+
Sbjct: 404 NTKKRSPTSRGSNEEGMLSFTSGVVLPSSGGVKSSGGTGDSDHSDLEASVVRETESSRVV 463
Query: 531 XXXXXXXXXXXXXANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 590
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA
Sbjct: 464 EPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDA 523
Query: 591 ISYIKELRT 599
ISYIKELRT
Sbjct: 524 ISYIKELRT 532
>29883.m002023 DNA binding protein, putative
Length = 503
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 55/56 (98%)
Query: 544 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELRT 599
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLLGDAI+YI +L+T
Sbjct: 349 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQT 404
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
Query: 124 LQQRLLTLIEGARESWTYAIFW-QSSYDYNGSVLGWXX--XXXXXXXXXXXXXXXXXXXX 180
LQ+ L L++G+ +W YAIFW SS GS+L W
Sbjct: 47 LQEGLNQLVDGS--NWNYAIFWCASSLKSGGSILTWGEGICRNQKCGAGEGNATGDRRLE 104
Query: 181 AVEQ--EHRKKVLRELNSLISGSNXXXXXXXXXXXXXXXWFFLVSMTQSF-VNGGGLPGH 237
VE E +K+VL++L+S + S+ F+L SM +F + P
Sbjct: 105 GVENGNESKKRVLQKLHSCFNASDGDNYAANLNGVSDVEMFYLTSMYFTFRCDSAYGPAE 164
Query: 238 AFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQSSDLM 297
++ +G +W + R+ + G QTL P +GVVELGS + I + +
Sbjct: 165 SYKSGRSIWASDVITCLEHYHLRSFLARSAGFQTLAFFPVKSGVVELGSIKSIPEEHIIG 224
Query: 298 NKVRVLF-NFNSVEVGSWP 315
+ + +F N+++ + P
Sbjct: 225 ERAKTIFGGANALQAKTCP 243
>29742.m001404 DNA binding protein, putative
Length = 615
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/56 (91%), Positives = 54/56 (96%)
Query: 544 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELRT 599
ANGREEPLNHVEAERQRREKLNQRFYALRAVVPN+SKMDKASLLGDAI+YI EL+
Sbjct: 438 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQA 493
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 118 IFNQETLQQRLLTLIE---GARESWTYAIFWQSSYDYNGS-VLGWXXXXXXXXXXXXXXX 173
I + E LQ +L L++ + SW YAIFWQ S +G VLGW
Sbjct: 47 IGSDENLQNKLSDLVDRPNASNFSWNYAIFWQISCSKSGDWVLGWGDGSCREPREGEEFE 106
Query: 174 XXXXXXXAVE----QEHRKKVLRELNSLISGSNXXXXXXXXXXXXXXXWFFLVSMTQSFV 229
+E Q RK+VL+ L++L S+ FFL SM SF
Sbjct: 107 ATRILNLRLEDETQQRMRKRVLQNLHTLSGESDEDNYALGLDRVTDTEMFFLASMYFSFP 166
Query: 230 NGGGLPGHAFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTEL 289
G G PG +G VW+ + + + C R+ + G++T+V + + GVVELGS
Sbjct: 167 RGEGGPGKCLASGKHVWIPDAFKSGSDYCVRSFLAKSAGIKTIVLVATDVGVVELGSVRS 226
Query: 290 IYQSSDLMNKVRVLFN-FNSVE 310
+ +S +++ +R F+ NSV+
Sbjct: 227 LPESFEMVQSIRSTFSTHNSVK 248
>27964.m000352 DNA binding protein, putative
Length = 486
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 123 TLQQRLLTLIEGARESWTYAIFWQSSYDYNGSV-LGWXXXXXXXXXXXXXXXXXXXXXXA 181
TLQQRL +++ + W YAIFWQ+ NG + L W
Sbjct: 24 TLQQRLQFILQSQPDWWAYAIFWQTLNADNGRIFLAWGDGHFQGTRDTSPNQATINNKHI 83
Query: 182 VEQEHR--------KKVLRELNSLISGSNXXXXXXXX--XXXXXXXWFFLVSMTQSFVNG 231
Q HR K+ ++ + +LI N WF+++S+T+SF G
Sbjct: 84 --QSHRISSLNSERKRGMKGIQALIGSDNHDIDVSIMDGSNATDAEWFYVMSLTRSFSAG 141
Query: 232 GGLPGHAFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIY 291
G+PG A GS VW+ G L CERA++ Q+ G++TLVCIP+ +GV+ELGS++LI
Sbjct: 142 DGVPGKALSTGSLVWLTGRQDLQFYNCERAKEAQMHGIETLVCIPTCDGVLELGSSDLIR 201
Query: 292 QSSDLMNKVRVLFNFNSVEVGSWPMGANP 320
++ ++ + + LF GS M NP
Sbjct: 202 ENWGVVQQAKSLF-------GSDMMPNNP 223
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/55 (80%), Positives = 48/55 (87%)
Query: 544 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
A GR+ PLNHVEAER RREKLN RFYALRAVVPNVS+MDKASLL DA+ YI EL+
Sbjct: 300 ALGRDTPLNHVEAERLRREKLNHRFYALRAVVPNVSRMDKASLLSDAVCYINELK 354
>30068.m002581 DNA binding protein, putative
Length = 479
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 119 FNQETL---QQRLLTLIEGARESWTYAIFWQSSYDYNGS-VLGWXXXXXXXXXXXXXXXX 174
F QE+L QQRL +++ E W YAIFWQ+S + NG VL W
Sbjct: 17 FCQESLPPLQQRLQYILQSRPEWWVYAIFWQASKEPNGRLVLSWGDGDFRDSKGLAVKPS 76
Query: 175 XXXXXXAVE--QEHRKKVLRELNSLISGSNXXXXXXXXXXXXXXXWFFLVSMTQSFVNGG 232
RKKV R+ SL G WF+ VS+TQSF G
Sbjct: 77 NNKQNQLKYGFNLERKKVTRDFQSLF-GDEMDLERLADADVTNYGWFYTVSVTQSFNVGE 135
Query: 233 GLPGHAFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQ 292
G+ G F +G+ W+ G L C R ++ ++ G+QTLVCI ++ GVVELGS+ +I +
Sbjct: 136 GILGQTFGSGTFTWLTGDHELQLYECGRVKEARMHGIQTLVCIATSTGVVELGSSNMINE 195
Query: 293 SSDLMNKVRVLF 304
L+ + LF
Sbjct: 196 DWSLVQLCKSLF 207
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 50/55 (90%)
Query: 544 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
G+E PLNHVEAERQRRE+LN RFYALR+VVPNVSKMDKASLL DA++YI+EL+
Sbjct: 297 VKGKELPLNHVEAERQRRERLNNRFYALRSVVPNVSKMDKASLLADAVTYIQELK 351
>27964.m000356 transcription factor, putative
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 48/55 (87%)
Query: 544 ANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
A G ++ L HVEAERQRREKLN RFYALRAVVPNVS+MDKASLL DA+SYI +L+
Sbjct: 101 ALGGDKALKHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINDLK 155
>28124.m000246 MYC transcription factor, putative
Length = 95
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 40/47 (85%)
Query: 218 WFFLVSMTQSFVNGGGLPGHAFFNGSPVWVAGSDRLSASPCERARQG 264
W FLVSMTQSF+NGGGLPG AFFNGS VWV G +RL++ CERARQG
Sbjct: 49 WSFLVSMTQSFINGGGLPGQAFFNGSSVWVTGLERLASLSCERARQG 95
>30174.m009029 transcription factor, putative
Length = 656
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 84/210 (40%), Gaps = 21/210 (10%)
Query: 139 WTYAIFWQSSYDYNGSVLGWXXXXXXXXXXXXXXXXXXXXXXAVEQEHRKKVLREL-NSL 197
W+YAIFW S G VL W R + LREL SL
Sbjct: 28 WSYAIFWSLSTSQQG-VLEWVDGYYNGDIKTRKTVQAMELKYDKIGLQRSEQLRELYKSL 86
Query: 198 ISG-----SNXXXXXXXXXXXXXXXWFFLVSMTQSFVNGGGLPGHAFFNGSPVWVAGSDR 252
+ G + W++LV M+ F G LPG AF NG +W+ +
Sbjct: 87 LEGEVDHHAKRPSAALSPEDLSDAEWYYLVCMSFVFTPGQSLPGRAFANGETIWLCNAQY 146
Query: 253 LSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQSSDLMNKVRV-LFNF----- 306
A R+ + +QT+VC P +GV+ELG TEL+ + +L+ ++ L +F
Sbjct: 147 ADAKVFSRSLLAKSASIQTVVCFPHLDGVIELGITELVAEDPNLIQHIKASLLDFSKPVC 206
Query: 307 --------NSVEVGSWPMGANPDQGENDTS 328
+S + P+GA D TS
Sbjct: 207 CEKTISAPHSADDDKDPVGAQVDHKTVHTS 236
>29647.m002101 conserved hypothetical protein
Length = 668
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 41/47 (87%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
NHV AER+RREKLN+RF LR++VP V+KMDKAS+LGD I Y+K+LR
Sbjct: 480 NHVLAERRRREKLNERFIILRSLVPFVTKMDKASILGDTIEYVKQLR 526
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 15/187 (8%)
Query: 127 RLLTLIEGARES--WTYAIFWQSSYDYNGSVLGWXXXXXXXXXXXXXXXXXXXXXXAVEQ 184
RL +++ A +S WTY++FWQ +L W
Sbjct: 8 RLQNMLQAAVQSVNWTYSLFWQLCPQQG--ILVWGDGYYNGAIKTRKTVQPMEVSAEEAS 65
Query: 185 EHRKKVLREL-NSLISG-----SNXXXXXXXXXXXXXXXWFFLVSMTQSFVNGGGLPGHA 238
R + LREL SL +G + WF+L+ ++ SF G GLPG A
Sbjct: 66 LQRSQQLRELYESLSAGETNQPARRPCAALSPEDLTESEWFYLMCVSFSFPPGVGLPGKA 125
Query: 239 FFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELGSTELIYQSSDLMN 298
+ VW+ G++ + + RA +T++CIP +GVVE G+TE + + +
Sbjct: 126 YARRQHVWLTGANEVDSKTFSRA-----ILAKTVLCIPLLDGVVEFGTTEKVQEDLGFVQ 180
Query: 299 KVRVLFN 305
+V+ F+
Sbjct: 181 RVKNFFS 187
>29804.m001498 DNA binding protein, putative
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 545 NGR-EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
NGR + +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+K+L+
Sbjct: 123 NGRISQSQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 177
>28179.m000479 DNA binding protein, putative
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 40/47 (85%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
+HV AER+RREKL+QRF AL AVVP + KMDKAS+LGDAI Y+K L+
Sbjct: 178 DHVIAERKRREKLSQRFIALSAVVPGLKKMDKASVLGDAIKYLKHLQ 224
>30147.m014419 Transcription factor ICE1, putative
Length = 549
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 40/48 (83%)
Query: 550 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+KEL
Sbjct: 360 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKEL 407
>28179.m000478 DNA binding protein, putative
Length = 331
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
+H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI ++K+L+
Sbjct: 155 DHILAERKRREKLSQRFIALSALVPGLKKMDKASVLGDAIKHVKQLQ 201
>30198.m000869 DNA binding protein, putative
Length = 213
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 40/45 (88%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
++ +ER RR+KLN+R +ALRAVVPN+SKMDKAS++ DAI YI++L
Sbjct: 36 NIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIDYIQDL 80
>29869.m001189 hypothetical protein
Length = 361
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 546 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
GR P ++AER+RR+ LN R Y LRA+VP +S ++K S+LGDAI ++KEL+
Sbjct: 185 GRGPPAKDLKAERRRRKMLNDRLYDLRALVPKISNLNKVSILGDAIEFVKELQ 237
>29646.m001078 conserved hypothetical protein
Length = 265
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
NH EAER+RR ++N LR++VP KMDKASLL + I Y+KEL+
Sbjct: 73 NHCEAERKRRARINAHLDTLRSLVPGAKKMDKASLLAEVIKYMKELK 119
>30131.m006993 conserved hypothetical protein
Length = 428
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 40/48 (83%)
Query: 550 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
P ++ AER+RR++LN R Y LR+VVP +SKMD+AS+LGDAI Y+KEL
Sbjct: 239 PAKNLMAERRRRKRLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 286
>29706.m001347 hypothetical protein
Length = 745
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 34/64 (53%), Gaps = 26/64 (40%)
Query: 226 QSFVNGGGLPGHAFFNGSPVWVAGSDRLSASPCERARQGQVFGLQTLVCIPSANGVVELG 285
QSFVNGGGLPG AFFNGSP TLVCIPSANGVVEL
Sbjct: 17 QSFVNGGGLPGQAFFNGSP--------------------------TLVCIPSANGVVELE 50
Query: 286 STEL 289
++
Sbjct: 51 EKQM 54
>30174.m008814 DNA binding protein, putative
Length = 465
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+K+L+
Sbjct: 288 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQ 333
>30138.m004021 DNA binding protein, putative
Length = 440
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 37/46 (80%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H ++ER+RR+++NQ+ AL+ +VPN SK DKAS+L + I Y+K+L+
Sbjct: 252 HNQSERRRRDRINQKMKALQKLVPNASKTDKASMLDEVIEYLKQLQ 297
>29869.m001185 hypothetical protein
Length = 593
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 43/53 (81%)
Query: 546 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
GR P +++AER+RR++LN R Y LRA+VP +S ++KAS+LGDAI ++KEL+
Sbjct: 340 GRGPPAKNLKAERRRRKRLNGRLYDLRALVPKISNLNKASILGDAIEFVKELQ 392
>28567.m000052 Transcription factor ICE1, putative
Length = 469
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 33/42 (78%)
Query: 556 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
ERQRR+ LN ++ AL+ +VPN +K D+ S++GDAI YIKEL
Sbjct: 272 TERQRRQHLNDKYKALQNLVPNPTKADRTSVVGDAIDYIKEL 313
>30076.m004542 hypothetical protein
Length = 584
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%)
Query: 550 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
P H +ER+RR+K+N++ AL+A++PN K+DKAS+L AI Y+K L+
Sbjct: 382 PQVHSLSERKRRDKINKKMRALQALIPNSDKVDKASMLDKAIEYLKTLQ 430
>29869.m001184 transcription factor, putative
Length = 576
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 550 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
P +++AER+RR++LN R Y LRA+VP +S ++KAS+LGDAI ++KEL+
Sbjct: 334 PAKNIDAERRRRKRLNGRLYDLRALVPKISNLNKASILGDAIEFVKELQ 382
>29842.m003700 DNA binding protein, putative
Length = 207
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 37/43 (86%)
Query: 556 AERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
AER+RR+KL++R ALRA VP ++ M+KA+++ DAI+YI+EL+
Sbjct: 43 AERRRRKKLSERLLALRASVPIITNMNKATIIEDAITYIQELQ 85
>29631.m001025 hypothetical protein
Length = 472
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 550 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
P ++ ER RR ++ Y LRA+VP ++KMD AS+LGDAI YI EL+
Sbjct: 300 PSKNLVTERNRRNRIKDGLYTLRALVPKITKMDIASILGDAIEYIGELQ 348
>29908.m006255 DNA binding protein, putative
Length = 246
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
+H EAER+RR+++N LR ++P+ +K DKASLL + + ++KELR
Sbjct: 49 SHKEAERRRRQRINAHLSTLRTLLPSTTKTDKASLLAEVVHHVKELR 95
>30128.m008988 conserved hypothetical protein
Length = 758
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 37/46 (80%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+K L+
Sbjct: 470 HNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 515
>28179.m000457 DNA binding protein, putative
Length = 354
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 549 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGD I Y+KEL
Sbjct: 182 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKEL 230
>29596.m000688 DNA binding protein, putative
Length = 349
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 38/49 (77%)
Query: 549 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
+P ++ AER+RR++LN R LR++VP +SKMD+ S+LGD I Y+KEL
Sbjct: 181 QPSKNLMAERRRRKRLNDRLAMLRSIVPKISKMDRTSILGDTIDYVKEL 229
>29814.m000735 hypothetical protein
Length = 288
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 552 NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
+H +AE++RR+++N + LR ++P KMDKA+LLG AI +K+L+
Sbjct: 87 SHSQAEKRRRDRINTQLGILRKLIPKSEKMDKAALLGSAIDQVKDLK 133
>29737.m001209 conserved hypothetical protein
Length = 474
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H AER RRE++ +R AL+ +VPN +K DKAS+L + I Y+K L+
Sbjct: 267 HSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQ 312
>30170.m013852 conserved hypothetical protein
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 36/46 (78%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H +E++RR ++N++ AL+ ++PN +K DKAS+L +AI Y+K+L+
Sbjct: 130 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 175
>29739.m003684 DNA-directed RNA polymerase beta chain, putative
Length = 592
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H AER RREK+ +R L+ +VPN SK+DKAS+L + I Y+K L+
Sbjct: 362 HSIAERLRREKIAERMKNLQELVPNSSKVDKASMLDEIIEYVKFLQ 407
>29869.m001188 hypothetical protein
Length = 94
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 546 GREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
G P +++AER+RR++ N R Y LRA+VP +S ++KAS+LGDAI ++K L+
Sbjct: 29 GSGPPAKNIDAERRRRKRFNGRLYDLRALVPKISNLNKASILGDAIEFVKVLQ 81
>27749.m000334 conserved hypothetical protein
Length = 246
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 551 LNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKEL 597
L H EAER+RR ++N +F LR V+PN+ K KAS+L + I +K+L
Sbjct: 82 LKHKEAERKRRVRINGQFAELRTVLPNLIKRKKASVLAETIKCLKDL 128
>30115.m001235 conserved hypothetical protein
Length = 406
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 36/46 (78%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H +E++RR ++N++ AL+ ++PN +K DKAS+L +AI Y+K+L+
Sbjct: 166 HNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQ 211
>30204.m001816 Phytochrome-interacting factor, putative
Length = 572
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 553 HVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIKELR 598
H +ER+RR+++N++ AL+ ++P +K DKAS+L +AI Y+K L+
Sbjct: 365 HNLSERRRRDRINEKMRALQELIPRCNKSDKASMLDEAIEYLKSLQ 410