Jatropha Genome Database

JcCA0225801.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0225801.10 + phase: 0 /partial
         (249 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006297 phosphoglycerate kinase, putative                       412   e-116
30169.m006296 phosphoglycerate kinase, putative                       374   e-104
30078.m002304 phosphoglycerate kinase, putative                       100   1e-21
29950.m001117 phosphoglycerate kinase, putative                        52   3e-07

>30169.m006297 phosphoglycerate kinase, putative
          Length = 479

 Score =  412 bits (1059), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/221 (95%), Positives = 215/221 (97%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPKFSLAPLVPRLSELLGIQVVKADD IGPEVEKLVASLPEGGVLLLENVRFYK
Sbjct: 139 GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDCIGPEVEKLVASLPEGGVLLLENVRFYK 198

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKN+PE AKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG
Sbjct: 199 EEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 258

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AVS+PKRPFAAIVGGSKVSSKIGVIESLLEK D+LLLGGGMIFTFYKAQGLSVGSSLVEE
Sbjct: 259 AVSSPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEE 318

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKVC 230
           DKL+LATSLL KAK KGVSLLLP+DVVIADKFAPDANSKV 
Sbjct: 319 DKLDLATSLLAKAKLKGVSLLLPTDVVIADKFAPDANSKVV 359


>30169.m006296 phosphoglycerate kinase, putative
          Length = 401

 Score =  374 bits (960), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/220 (85%), Positives = 206/220 (93%)

Query: 10  GRPKGVTPKFSLAPLVPRLSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYK 69
           GRPKGVTPK+SL PLVPRLSELLG++V  A D IG EVEKLVA +PEGGVLLLENVRF+K
Sbjct: 66  GRPKGVTPKYSLKPLVPRLSELLGVEVKMASDCIGEEVEKLVAEIPEGGVLLLENVRFHK 125

Query: 70  EEEKNDPEHAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVG 129
           EEEKN+PE AKKLA LAD+YVNDAFGTAHRAHASTEGV K+LKPSVAGFL+QKELDYLVG
Sbjct: 126 EEEKNEPEFAKKLAGLADVYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVG 185

Query: 130 AVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEE 189
           AV+NPK+PFAAIVGGSKVS+KIGVIESLLEKVD+L+LGGGMIFTFYKAQG SVGSSLVE 
Sbjct: 186 AVANPKKPFAAIVGGSKVSTKIGVIESLLEKVDILILGGGMIFTFYKAQGHSVGSSLVEG 245

Query: 190 DKLNLATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKV 229
           DKL+LA+SL+EKAKAKGV LLLP+DVVIADKFA DANSKV
Sbjct: 246 DKLDLASSLIEKAKAKGVDLLLPTDVVIADKFAADANSKV 285


>30078.m002304 phosphoglycerate kinase, putative
          Length = 678

 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 97/187 (51%), Gaps = 1/187 (0%)

Query: 28  LSELLGIQVVKADDSIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNDPEHAKKLASLAD 87
           LS +L ++VV A   I   +   + +L    + LLEN+  +KEE  N    A+ L+S  D
Sbjct: 160 LSSILQLRVV-ALHCISTYLPMKMEALRIADIFLLENLSEFKEEVANCLRFAELLSSGVD 218

Query: 88  LYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKV 147
           ++VND+F  +H+  AST  V  F    VAGF  +K L  L  A +  K+P+ AI+GG  +
Sbjct: 219 IFVNDSFSLSHKILASTVAVAHFCSAHVAGFHFEKSLFQLKKAGTTNKKPYIAIIGGGNL 278

Query: 148 SSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGLSVGSSLVEEDKLNLATSLLEKAKAKGV 207
             K   ++ L  K D L+  G M F    A G SV SSL+E      A  ++  A  + +
Sbjct: 279 YDKAAALQFLASKCDGLVFVGMMSFQIMHALGYSVPSSLIEPKAHKAALDIIHFAHKRNI 338

Query: 208 SLLLPSD 214
           S+L P D
Sbjct: 339 SILYPKD 345


>29950.m001117 phosphoglycerate kinase, putative
          Length = 83

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/28 (92%), Positives = 27/28 (96%)

Query: 202 AKAKGVSLLLPSDVVIADKFAPDANSKV 229
           AKAKGVSLLLP+DVVIADKFA DANSKV
Sbjct: 2   AKAKGVSLLLPTDVVIADKFAADANSKV 29