Jatropha Genome Database
- JcCA0224581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0224581.10 - phase: 0 /partial
(319 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008759 amidase, putative 453 e-128
29651.m000292 amidase, putative 273 5e-74
29806.m000976 amidase, putative 267 4e-72
29636.m000758 glutamyl-tRNA(gln) amidotransferase subunit A, put... 71 7e-13
30147.m014381 Glutamyl-tRNA(Gln) amidotransferase subunit A, put... 67 8e-12
55479.m000037 glutamyl-tRNA(gln) amidotransferase subunit A, put... 67 1e-11
29804.m001523 glutamyl-tRNA(gln) amidotransferase subunit A, put... 66 3e-11
29756.m000503 amidase, putative 60 2e-09
33669.m000015 amidase, putative 58 6e-09
29756.m000502 amidase, putative 57 1e-08
28930.m000010 glutamyl-tRNA(gln) amidotransferase subunit A, put... 50 1e-06
29756.m000496 amidase, putative 49 2e-06
>30128.m008759 amidase, putative
Length = 500
Score = 453 bits (1165), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/319 (69%), Positives = 245/319 (76%), Gaps = 30/319 (9%)
Query: 1 MARNPDYGAFMEKFVLKPTNSSDELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAAT 60
MA +PDYGAFMEKFVLKP++SSD+LPL+ LTFAVKDIFDVDGYVTGFGNPDWARTH AAT
Sbjct: 73 MAISPDYGAFMEKFVLKPSSSSDQLPLHSLTFAVKDIFDVDGYVTGFGNPDWARTHSAAT 132
Query: 61 STAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXX 120
+TAPAVLA+LR GATC+GK +MDEMAYSINGEN HYGTP NP APD VP
Sbjct: 133 ATAPAVLAVLRGGATCVGKVIMDEMAYSINGENAHYGTPTNPSAPDRVPGGSSSGSAVAV 192
Query: 121 XXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPVI 180
KLVDFSLG+DTGGSVRVPASYC ILGFRPSHGVVS +GVIP+AQSFDTVGWF+RNPVI
Sbjct: 193 GAKLVDFSLGSDTGGSVRVPASYCGILGFRPSHGVVSVSGVIPMAQSFDTVGWFSRNPVI 252
Query: 181 LNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFSVIYE 240
L HVGR+LLQLPD+D +P+QI IAEDCFQLSSIP RVSQ+LVKSVEKLFGG
Sbjct: 253 LKHVGRLLLQLPDVDRTKPNQIFIAEDCFQLSSIPKKRVSQVLVKSVEKLFGGD------ 306
Query: 241 LFWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYXIXXX 300
+VKH+ LGDYVE+KVPSL+HFMSKEIKEQ Y I
Sbjct: 307 ------------------------IVKHVNLGDYVEDKVPSLRHFMSKEIKEQEYNIAPL 342
Query: 301 XXXXXXMRLLERYEFKNNH 319
MR+L+RYEFK NH
Sbjct: 343 AALSSAMRMLQRYEFKTNH 361
>29651.m000292 amidase, putative
Length = 589
Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 139/291 (47%), Positives = 179/291 (61%), Gaps = 31/291 (10%)
Query: 29 GLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEMAYS 88
GLTFAV D+FD++GYVTGFG+PDWARTH AA+ T+ V A++ GATCIGKTV+DE+AYS
Sbjct: 60 GLTFAVSDVFDIEGYVTGFGHPDWARTHEAASQTSLVVSALVEGGATCIGKTVVDELAYS 119
Query: 89 INGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCSILG 148
INGEN+HYGTP NP P VP LVDFSLG DT G VRVPA +C I+G
Sbjct: 120 INGENEHYGTPTNPAVPARVPGGSSSGAAVAVAANLVDFSLGVDTVGGVRVPAGFCGIIG 179
Query: 149 FRPSHGVVSTAGVIPLAQSFDTVGWFARNPVILNHVGRVLLQLPDLDLVRPSQIIIAEDC 208
FRPS+G + G++P++ S DTVGWFAR+P ++ VG +LLQLP P QIIIA+DC
Sbjct: 180 FRPSYGAIPNTGILPISASLDTVGWFARDPNVIRRVGHLLLQLPFGVQRNPKQIIIADDC 239
Query: 209 FQLSSIPNGRVSQILVKSVEKLFGGQFSVIYELFWNPADSLGILRNIYMFRNGPSHVVKH 268
FQL IP R++Q+++KS EK+FG Q V++H
Sbjct: 240 FQLLKIPVDRIAQVVIKSTEKIFGRQ------------------------------VLRH 269
Query: 269 LTLGDYVENKVPSLKHFMSKEIKEQXYXIXXXXXXXXXMRLLERYEFKNNH 319
L D + ++V SLK ++ + MRLL RYEF++NH
Sbjct: 270 EILEDVLFSRVRSLKLLHDQKTNGE-LRTSSIRLLANIMRLLHRYEFRHNH 319
>29806.m000976 amidase, putative
Length = 607
Score = 267 bits (683), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 185/323 (57%), Gaps = 35/323 (10%)
Query: 1 MARNPDYGAFMEKFVL----KPTNSSDELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTH 56
M + D+GAF+EKF + + + + PL+GL+FA+KDIFDV YVTGFGNPDW RTH
Sbjct: 45 MIKREDFGAFIEKFEILPFPQAPPPAAKQPLSGLSFAIKDIFDVKDYVTGFGNPDWRRTH 104
Query: 57 LAATSTAPAVLAILREGATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXX 116
A A AV A+L+ GATC+GKT+MDE+ I+GEN HYGTP+NP P VP
Sbjct: 105 EVAEKMAVAVTALLKNGATCVGKTIMDELGLGISGENLHYGTPMNPIMPSFVPGGSSSGS 164
Query: 117 XXXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFAR 176
+LVDF+LGTDT G +R+PA++C I G+RPSHG VS G IP AQS DTVGW AR
Sbjct: 165 AVTVAAELVDFALGTDTIGCIRIPAAFCGIFGYRPSHGTVSMIGAIPNAQSLDTVGWLAR 224
Query: 177 NPVILNHVGRVLLQLPDLDLVRPSQIIIAEDCFQLSSIPNGRVSQILVKSVEKLFGGQFS 236
+P IL VG LL+L ++ + +II A+D FQL +P + ++ K++E L G Q
Sbjct: 225 DPSILRCVGHALLKLNAVEARKARRIIFADDLFQLCKVPKQKTEYVISKAIENLSGYQ-- 282
Query: 237 VIYELFWNPADSLGILRNIYMFRNGPSHVVKHLTLGDYVENKVPSLKHFMSKEIKEQXYX 296
+P KHL G Y+ + VPSLK F+ + Q
Sbjct: 283 -------SP---------------------KHLNFGQYIASNVPSLKGFLEQSGNLQS-G 313
Query: 297 IXXXXXXXXXMRLLERYEFKNNH 319
M L+RYEFK NH
Sbjct: 314 TSALKALSSVMVSLQRYEFKTNH 336
>29636.m000758 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 561
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 26 PLNGLTFAVKD-IFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDE 84
PL G+ VKD I VD TG + A A +V + GA +GKT +DE
Sbjct: 111 PLAGVLVGVKDNICTVDMPSTG---GSRILENYRAPYDATSVKRLKEMGAIVVGKTNLDE 167
Query: 85 MAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYC 144
E + NP VP + SLG+DTGGSVR PAS+C
Sbjct: 168 FGMGSTTEGSAFQVTSNPWDVSRVPGGSSGGSAAAVSARQCVVSLGSDTGGSVRQPASFC 227
Query: 145 SILGFRPSHGVVSTAGVIPLAQSFDTVGW 173
++G +P++G VS G++ A S D +G
Sbjct: 228 GVVGLKPTYGRVSRFGLMSYASSLDVIGL 256
>30147.m014381 Glutamyl-tRNA(Gln) amidotransferase subunit A,
putative
Length = 581
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 10 FMEKFVLKPTNSSDEL--------PLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATS 61
+ ++ K +DEL PL+G+ + +KDI V GY T +G+ + L +
Sbjct: 165 YTDELAYKQAKEADELLAKGVYLGPLHGIPYGLKDIIAVSGYKTTWGSRSFKDQVL---N 221
Query: 62 TAPAVLAILRE-GATCIGKTVMDEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXX 120
V LR GA + K V +AY + G NP +
Sbjct: 222 IDAWVYKRLRSVGAVLVAKLVSGSLAYD---DIWFGGRTRNPWNIEEFSTGSSAGPAAST 278
Query: 121 XXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
+V F++G++T GS+ PAS C + RP+ G V GV+ +++S D +G F R+
Sbjct: 279 SSGMVPFAIGSETAGSITYPASRCGVTALRPTLGTVGRTGVMSISESLDKLGPFCRS 335
>55479.m000037 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 228
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 7/154 (4%)
Query: 26 PLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEM 85
PL+GL +VKD+ V G FG+ A +LAA AP+V I GA +GKT E
Sbjct: 71 PLHGLPVSVKDLIAVGGVRQTFGSRVMA-DNLAA-GDAPSVERIKAAGACIVGKTTTSEF 128
Query: 86 AYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCS 145
G++ G NP P + F+LGTD GGS+R PAS+C
Sbjct: 129 GCKAVGDSPLTGVTRNPWDLSKTPGGSSCGAAASVAAGVTPFALGTDGGGSIRAPASFCG 188
Query: 146 ILGFRPSHGVVSTAGVIPLAQ--SFDTVGWFARN 177
+ G +P V V P++ + VG AR+
Sbjct: 189 VFGIKPQFARVP---VFPVSATPTLGHVGPLARS 219
>29804.m001523 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 607
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 27 LNGLTFAVKDIFDVDGYV-TGFGNPDWARTHLAATSTAPAVLAILREGATCIGKTVMDEM 85
L+G+ A+KD D+D Y G W + A +V + G +GK M E+
Sbjct: 197 LDGIFMAIKD--DIDCYPHPSKGATTWMHEVRSVKKDAVSVSRLRSCGVIFVGKANMHEL 254
Query: 86 AYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPASYCS 145
G N +YGT NP A D L +LGTD GGSVR+P+S C
Sbjct: 255 GMGTTGNNPNYGTTRNPHATDRYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCG 314
Query: 146 ILGFRPSHGVVSTAGVIPLAQSFDTVGWFARN 177
++G + ++G G + + + +G A +
Sbjct: 315 VVGLKTTYGRTDMEGSLCHYGTVEIIGPIASS 346
>29756.m000503 amidase, putative
Length = 519
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMA-----YSINGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V + R GA +GK M E A + NG G NP P
Sbjct: 133 AGVVAKLRRAGAIILGKASMTEWAAFRSNHLPNGYCARSGQGKNPYVLSADPCGSSSGSG 192
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFAR 176
LV S+GT+T GS+ P+S S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 193 ISVAANLVAVSIGTETDGSILCPSSANSVVGIKPTVGLTSRAGVVPISPRQDTVGPMCR 251
>33669.m000015 amidase, putative
Length = 367
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 5/157 (3%)
Query: 24 ELPLNGLTFAVKDIFDVDGYVTGFGNPDWARTHLAATSTAPAVLAILRE-GATCIGKTVM 82
LPL GL +VK+ F + G G+ R A + A++ L+ GA I ++ +
Sbjct: 26 SLPLFGLPCSVKETFGLAGQEVTAGS---LRMAPQAHAEDAAIVGRLKAAGAVVIARSNV 82
Query: 83 DEMAYSINGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDFSLGTDTGGSVRVPAS 142
E A + N +G NP V F +G+D GS+R+PA+
Sbjct: 83 PEFAMTAESSNPRFGRTSNPLDLGRVAGGSSGGEGALVGSGGSAFGVGSDILGSIRIPAA 142
Query: 143 YCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFARNPV 179
+C ++GF+P V G P +T W A P+
Sbjct: 143 FCGVVGFKPHSRAVDQRGTWPTVTG-NTRSWLALGPL 178
>29756.m000502 amidase, putative
Length = 510
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 63 APAVLAILREGATCIGKTVMDEMA--YSI---NGENKHYGTPINPCAPDCVPXXXXXXXX 117
A V+ + + GA +GK M E A S+ NG + G NP P
Sbjct: 133 AGVVMKLRKTGAIILGKASMTEWAAFRSLKLPNGFSARGGQGKNPYVLSADPCGSSSGPA 192
Query: 118 XXXXXKLVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFAR 176
LV S+GT+T GS+ P++ S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 193 ISVAANLVAVSVGTETDGSILCPSNANSVVGIKPTVGLTSRAGVVPVSFRQDTVGPICR 251
>28930.m000010 glutamyl-tRNA(gln) amidotransferase subunit A,
putative
Length = 88
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 124 LVDFSLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVG 172
L +LG D GGSVR+PA+ C ++GF+P+ G V +GV+PL + VG
Sbjct: 27 LCPVALGVDGGGSVRMPAALCGVVGFKPTFGRVPHSGVLPLNWTVGMVG 75
>29756.m000496 amidase, putative
Length = 509
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 73 GATCIGKTVMDEMAYSI-----NGENKHYGTPINPCAPDCVPXXXXXXXXXXXXXKLVDF 127
GA +GK E + +G G +NP P +V
Sbjct: 146 GAVILGKASQSEWYRTRSMEIPDGRCARGGQAVNPYVKWGNPCGSSSGSAISVATNMVAV 205
Query: 128 SLGTDTGGSVRVPASYCSILGFRPSHGVVSTAGVIPLAQSFDTVGWFAR 176
SLGT+T S+ P+ S++G +P+ G+ S AGV+P++ DTVG R
Sbjct: 206 SLGTETDASILCPSDCNSVVGLKPTVGLTSRAGVVPVSPRQDTVGPICR 254