Jatropha Genome Database

JcCA0220511.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0220511.20 + phase: 1 /partial
         (152 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative      258   6e-70
47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative      257   2e-69
30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative      255   5e-69
30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative      226   4e-60
30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative      101   2e-22
30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative      100   3e-22
37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative      100   3e-22

>30190.m010986 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 295

 Score =  258 bits (660), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 129/152 (84%), Positives = 134/152 (88%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV
Sbjct: 144 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 203

Query: 61  DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
           DLTVRL                SEG +KGILGYT++DVVS+DFVGD+RSSIFDAKAGIAL
Sbjct: 204 DLTVRLEKKATYEDIKAAIKAESEGKLKGILGYTDEDVVSSDFVGDSRSSIFDAKAGIAL 263

Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASVQ 152
           NDNFVKLVSWYDNEWGYSSRVIDLI HIASVQ
Sbjct: 264 NDNFVKLVSWYDNEWGYSSRVIDLIRHIASVQ 295


>47543.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 206

 Score =  257 bits (656), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/152 (82%), Positives = 131/152 (86%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGMAFRVPTVDVSVV
Sbjct: 55  TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVV 114

Query: 61  DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
           DLTVRL                SEG +KGILGYTEDDVVSTDF+GD RSSIFDAKAGIAL
Sbjct: 115 DLTVRLEKSATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDKRSSIFDAKAGIAL 174

Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASVQ 152
           ND FVKLVSWYDNEWGYS+RV+DLI H+ASV 
Sbjct: 175 NDKFVKLVSWYDNEWGYSTRVVDLIVHVASVH 206


>30147.m013783 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 337

 Score =  255 bits (652), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 124/152 (81%), Positives = 131/152 (86%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPTVDVSVV
Sbjct: 186 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMSFRVPTVDVSVV 245

Query: 61  DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
           DLTVRL                SEG +KGILGYTEDDVVSTDF+GD RSSIFDAKAGIAL
Sbjct: 246 DLTVRLEKSATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDKRSSIFDAKAGIAL 305

Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASVQ 152
           ND FVKLVSWYDNEWGYS+RV+DLI H+ASV 
Sbjct: 306 NDKFVKLVSWYDNEWGYSTRVVDLIVHVASVH 337


>30169.m006270 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 426

 Score =  226 bits (575), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 112/151 (74%), Positives = 122/151 (80%)

Query: 1   TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
           TQKTVDGPSMKDWRGGR A  NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 272 TQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 331

Query: 61  DLTVRLXXXXXXXXXXXXXXXXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIAL 120
           DLT RL                SEG +KGILGYT++DVVS DFVGD+RSSIFDAKAGI L
Sbjct: 332 DLTCRLEKSASYEDVKAAIKYASEGPLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGL 391

Query: 121 NDNFVKLVSWYDNEWGYSSRVIDLICHIASV 151
           +  F+KLVSWYDNEWGYS+RV+DLI H+A V
Sbjct: 392 SAAFMKLVSWYDNEWGYSNRVLDLIEHMALV 422


>30131.m006931 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 404

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 79/123 (64%)

Query: 22  NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLXXXXXXXXXXXXXXX 81
           NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVDL V++               
Sbjct: 273 NIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEVNAAFRE 332

Query: 82  XSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRV 141
            ++  +KGIL   ++ +VS DF   + SS  D+   + + D+ VK+++WYDNEWGYS RV
Sbjct: 333 SADKELKGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRV 392

Query: 142 IDL 144
           +DL
Sbjct: 393 VDL 395


>30170.m013796 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 458

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 22  NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLXXX-XXXXXXXXXXX 80
           NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVDL V +               
Sbjct: 297 NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFR 356

Query: 81  XXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSR 140
             +EG +KGIL   +  +VS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS R
Sbjct: 357 KAAEGPLKGILDVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 416

Query: 141 VIDLICHIAS 150
           V+DL   +A+
Sbjct: 417 VVDLAHLVAA 426


>37452.m000013 glyceraldehyde 3-phosphate dehydrogenase, putative
          Length = 193

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/130 (47%), Positives = 81/130 (62%), Gaps = 1/130 (0%)

Query: 22  NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLXXX-XXXXXXXXXXX 80
           NI+P+STGAAKAV  VLP L GKL G+A RVPT +VSVVDL V +               
Sbjct: 32  NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGLTAEDVNAAFR 91

Query: 81  XXSEGSMKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSR 140
             +EG +KGIL   +  +VS DF   + SS  D+   + + D+ VK+V+WYDNEWGYS R
Sbjct: 92  KAAEGPLKGILDVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 151

Query: 141 VIDLICHIAS 150
           V+DL   +A+
Sbjct: 152 VVDLAHLVAA 161