Jatropha Genome Database

JcCA0217021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0217021.10 - phase: 2 /partial
         (227 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30180.m001067 protein-s isoprenylcysteine O-methyltransferase, p...   364   e-101

>30180.m001067 protein-s isoprenylcysteine O-methyltransferase,
           putative
          Length = 294

 Score =  364 bits (934), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 176/228 (77%), Positives = 198/228 (86%), Gaps = 1/228 (0%)

Query: 1   APIVAKCDRSRVLATWAPYCGNIAPTEFQIEFSSVRHLNPRQFVEKLSNELKVCGVVAGE 60
           APIVAKCDR+RVLA+WA YC NI P EFQI+FSSVRHLNP+QFVEKLS EL+VCGVVAGE
Sbjct: 67  APIVAKCDRNRVLASWAQYCDNITPLEFQIQFSSVRHLNPQQFVEKLSKELRVCGVVAGE 126

Query: 61  NYRFGYKAAGDASELVRLCEEYGMEAYIIKSVMDKNKDLRNMNLSDLKDRGQVSSTRVRH 120
           NYRFGYKAAGDAS+LVRLCEEYG+ AYII SVMD  KD  N N  D KDRGQVSSTRVR 
Sbjct: 127 NYRFGYKAAGDASDLVRLCEEYGLGAYIINSVMDNKKDPINSNSRDSKDRGQVSSTRVRQ 186

Query: 121 ALAVGDMKYVSELLGRRHRLVMMLKDQKGLT-STSSKWKFSITRSCLLNLPPKDGFYENC 179
           ALA+GDMKYVS+LLGRRHRL++MLKDQ+GLT S+SS+W+ S  +SCLLNLPPKDGFY+NC
Sbjct: 187 ALALGDMKYVSKLLGRRHRLMLMLKDQRGLTSSSSSRWRISAPKSCLLNLPPKDGFYKNC 246

Query: 180 FLIFGNAEPVKCSVFIDSTYIHLEIDEIGLSNYNSSQAFQLMGVEFGD 227
           FL+FGN   + CS  IDS YIHLE+DE+GLS YN SQ FQL+GVEFGD
Sbjct: 247 FLLFGNENRMTCSAIIDSMYIHLEMDELGLSIYNGSQDFQLLGVEFGD 294