Jatropha Genome Database

JcCA0215901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0215901.10 - phase: 1 /partial
         (105 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29917.m002020 ATP binding protein, putative                           197   6e-52

>29917.m002020 ATP binding protein, putative
          Length = 354

 Score =  197 bits (502), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 102/105 (97%)

Query: 1   EGYYGGVRLLMAICRVFYKHCKENGIDLHSRNFTLSYDTNIPRQTGLSGSSAIVTAALSC 60
           EGYYGGVRLLMAIC+VF+ +C+EN I LHSRNFTL+YDTNIPRQTGLSGSSAIVTAAL+C
Sbjct: 76  EGYYGGVRLLMAICKVFFLYCEENEIHLHSRNFTLNYDTNIPRQTGLSGSSAIVTAALNC 135

Query: 61  LLDFYKVRHLIKVEIRPKLVLSAEQELGIVAGLQDRVAQVYGGLV 105
           LLDFYKVRHLIKV+IRPKLVLSAEQELGIVAGLQDRVAQVYGGLV
Sbjct: 136 LLDFYKVRHLIKVDIRPKLVLSAEQELGIVAGLQDRVAQVYGGLV 180