Jatropha Genome Database

JcCA0207521.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0207521.20 + phase: 1 /TE/partial
         (447 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010988 conserved hypothetical protein                           73   3e-13
28752.m000330 conserved hypothetical protein                           69   5e-12
28331.m000097 conserved hypothetical protein                           66   4e-11
29908.m006211 conserved hypothetical protein                           59   4e-09
29788.m000331 conserved hypothetical protein                           59   4e-09
28331.m000098 conserved hypothetical protein                           57   1e-08
29506.m000168 conserved hypothetical protein                           51   1e-06
30065.m001147 conserved hypothetical protein                           50   2e-06
30152.m002416 conserved hypothetical protein                           50   2e-06

>30190.m010988 conserved hypothetical protein
          Length = 138

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 15/138 (10%)

Query: 128 LDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNNEYDQIRVQVLG*DPFPSLQQAYSF 187
           +D  +  +  C+ D    Q+ I+ +R+Y+FLA L+  +D IR  +L   P P +++ ++ 
Sbjct: 1   MDRRRPIKMVCSTDLHVRQEEIQKDRIYNFLAALDQIFDSIRNDLLRMKPIPGIKECFNM 60

Query: 188 VQ*EKTRRNAMV---------HRSTIDKAGLISNSAREYIQDAKNSSSDKDQLFCDYCGK 238
           VQ E  R+  M+         H + I K   IS +    I+DA     +KD+L C +C  
Sbjct: 61  VQREAQRQVTMLGKRELGEGSHMAMISKTS-ISKTTLRAIEDA-----EKDKLRCSHCNG 114

Query: 239 NRHTKEFCWKLHGRPTKG 256
            RHTK+  +++HG+  KG
Sbjct: 115 TRHTKDTYFEIHGKIEKG 132


>28752.m000330 conserved hypothetical protein
          Length = 317

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 40/224 (17%)

Query: 70  ENSLIMSWLINSMQPTISRGYLLLDTAKKIWDAASH-------------------ETKQG 110
           ++ L++SWL+NS++P +S  +    ++  +W A                      + +Q 
Sbjct: 38  QDQLVISWLLNSIEPKVSEIFSYSTSSFDLWIAVKEMFGDMNNAARVFQLKKDLSDLRQS 97

Query: 111 DLTIAQYFAKLSGLWQELDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNNEYDQIRV 170
             +  Q        W ELD Y+ +    T D+T +    E ++++  LA L  +YD ++ 
Sbjct: 98  SRSFVQLLGLFKAKWNELDLYRLY----TTDSTIILYRSEEDKMFQLLAALGPDYDDLKS 153

Query: 171 QVLG*DPFPSLQQAYSFVQ*EKTRRNAMVHRST---------IDKAGLISNSAREYIQDA 221
            ++     PSLQ   + +Q E+  R  M H +T          +    +SN+ R Y    
Sbjct: 154 HLIMSPKLPSLQTVCNTIQREEVHRRVMNHNATANVVEGGQPAEARAFLSNTQRPY---- 209

Query: 222 KNSSSDKDQLFCDYCGKN--RHTKEFCWKLHG--RPTKGRGGKR 261
           +    D     C++ G +   H K+ CW LH   +P +  G K 
Sbjct: 210 RGRQPDLKCSHCEHIGHSGIGHQKDKCWILHPELKPKQQNGYKE 253


>28331.m000097 conserved hypothetical protein
          Length = 125

 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 2/91 (2%)

Query: 14  HSESPSLHISRVKSDGTNFLAW--SCLLFIEARGLQGYLDGGAIKPVSTDPGFNKWKSEN 71
           H+E+ S  I   +    N+ +W  S LL I  R  Q +L+G  IKP   DP F  WK  N
Sbjct: 30  HTENHSSVILTPELTAINYTSWRSSFLLAISIRNKQDFLNGSTIKPPIQDPIFQSWKRCN 89

Query: 72  SLIMSWLINSMQPTISRGYLLLDTAKKIWDA 102
           +L+++WL+ S+ P I+     +D AK+IW++
Sbjct: 90  NLLIAWLLCSISPMIAPTVFYMDDAKQIWES 120


>29908.m006211 conserved hypothetical protein
          Length = 183

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)

Query: 142 ATQVQKLIEVERVYDFLAGLNNEYDQIRVQVLG*DPFPSLQQAY-SFVQ*EKTRRNAMVH 200
           A  +  L  + ++  F  GLN+ YD  R Q+L  DPFP++ +AY   +  EK R    +H
Sbjct: 38  AKAISDLYSMNKLMQFRMGLNDCYDHTRNQILVMDPFPTVNRAYFMLLSVEKQRE---IH 94

Query: 201 RSTIDKAGLISNSAREYIQDAKNSSSDKDQLFCDYCGKNRHTKEFCWKLHGRP 253
            +  +K  +    A++          DK+  FCD+C    H ++ C+K+HG P
Sbjct: 95  -NNYNKDNMSKRGAKK---------KDKENKFCDHCRTKGHERDTCFKIHGVP 137


>29788.m000331 conserved hypothetical protein
          Length = 103

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 2/84 (2%)

Query: 19  SLHISRVKSDGTNFLAWS--CLLFIEARGLQGYLDGGAIKPVSTDPGFNKWKSENSLIMS 76
           SL ++ V  +G N+++WS    L +  R    Y++G    P  +DP F+ W+S +  +MS
Sbjct: 18  SLRLTSVLLNGFNYVSWSRAASLALLGRSKLSYVNGKKEAPKPSDPSFDAWQSNDQPVMS 77

Query: 77  WLINSMQPTISRGYLLLDTAKKIW 100
           W++NSM+P I+  ++  D+    W
Sbjct: 78  WILNSMEPKIAETFVFADSDYDPW 101


>28331.m000098 conserved hypothetical protein
          Length = 143

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 17/122 (13%)

Query: 145 VQKLIEVERVYDFLAGLNNEYDQIRVQVLG*DPFPSLQQAYSFVQ*EKTRRNAMVHRSTI 204
           V K + +   + FL G+N  Y  IR +++   PFP++ QAY+ V  E+ +R+ +      
Sbjct: 25  VSKCLLICNTFKFLNGVNESYQAIRSRIIIMKPFPTINQAYNMVIREEKQRSLLASPQNF 84

Query: 205 DKAGLISNSAREYIQDAKNSSSDKDQLFCDYCGKNRHTKEFCWKLHGRP-----TKGRGG 259
            ++  ++          K S SD   L+C  C K+ H K+ C+K+ G P     TKG+  
Sbjct: 85  HESAAMA---------VKKSISD---LYCTQCWKSGHLKDKCYKIIGFPPDFKFTKGKNK 132

Query: 260 KR 261
            R
Sbjct: 133 SR 134


>29506.m000168 conserved hypothetical protein
          Length = 128

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 1   DSMGDGKKVDISFHSESPSLHISRVKSDGTNFLAWS--CLLFIEARGLQGYLDGGAIKPV 58
           DS    ++ + S +++SP + +     +  N++ WS    L + A+   GY++G   KP 
Sbjct: 23  DSSNSSQETNHSQNNDSPGMPLISTLMNENNYIPWSRSVKLALGAKDKLGYINGEIAKPA 82

Query: 59  STDPGFNKWKSENSLIMSWLINSMQPTISRGYLLLDTAKKIWD 101
           ST   +  WK  + L+ +W+++S+    + G++   + K +W+
Sbjct: 83  STAKKYKMWKKTDCLVAAWILSSILKEHAEGFIYCSSTKDLWE 125


>30065.m001147 conserved hypothetical protein
          Length = 201

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 12/120 (10%)

Query: 136 AKCTDDATQ-VQKLIEVERVYDFLAGLNNEYDQIRVQVLG*DPFPSLQQAYSFV-Q*EKT 193
           + CT + ++ V  L    R+   L GLN+ Y+ +R QVL  +P P +   YS + + EK 
Sbjct: 15  SHCTCEVSKKVSTLNGRNRIMQLLMGLNDGYEAVRSQVLLMEPLPGINNVYSMILRIEKL 74

Query: 194 RRNAMVHRSTIDKAGLISNSAREYIQDA-KNSSSDKDQL-FCDYCGKNRHTKEFCWKLHG 251
           R   +V+   +D A      ++ Y +D+ +N    KD    C+YC K+ H KE  +KL G
Sbjct: 75  R---IVYNFVLDHA-----KSQSYRKDSGENKVYGKDLTKHCNYCKKDGHIKENSYKLIG 126


>30152.m002416 conserved hypothetical protein
          Length = 147

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 62/145 (42%), Gaps = 28/145 (19%)

Query: 121 LSGLWQELDCYQDFQAKCTDDATQVQKLIEVERVYDFLAGLNNEYDQIRVQVLG*DPFPS 180
           ++ LW EL C           A  V  +    R+  FL GLN+  D +R QVL  DPFPS
Sbjct: 1   MNKLWNELVCLMPIPICTCGAAKGVADITSFNRLMQFLMGLNDSSDNMRNQVLEMDPFPS 60

Query: 181 LQQAYSFV-Q*EKTRR-----------NAMVHRS----TIDKAGL-------ISNSAREY 217
              AYS V + EK R             AM+ R+    T  K G         + S R+ 
Sbjct: 61  ANIAYSMVFRVEKQREVPTIFPKTDEIVAMMIRAQNFKTTGKGGAGRGSWSGRNGSNRDG 120

Query: 218 IQDAKN-----SSSDKDQLFCDYCG 237
            +  KN     +  +++ + CD+CG
Sbjct: 121 QEPRKNNYKRYNGQEEEAMHCDFCG 145