Jatropha Genome Database
- JcCA0193141.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0193141.20 - phase: 2 /pseudo/partial
(94 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004700 AMP dependent CoA ligase, putative 100 1e-22
30190.m010972 AMP dependent CoA ligase, putative 84 1e-17
30170.m014327 AMP dependent CoA ligase, putative 82 6e-17
30147.m013769 AMP dependent CoA ligase, putative 77 1e-15
29589.m001235 AMP dependent CoA ligase, putative 70 2e-13
28872.m000246 AMP dependent CoA ligase, putative 68 8e-13
30078.m002285 AMP dependent CoA ligase, putative 68 8e-13
28429.m000109 AMP dependent CoA ligase, putative 65 6e-12
30068.m002672 AMP dependent CoA ligase, putative 60 2e-10
30131.m006921 AMP dependent CoA ligase, putative 60 3e-10
30073.m002251 AMP dependent CoA ligase, putative 59 5e-10
29929.m004640 AMP dependent CoA ligase, putative 52 7e-08
>29929.m004700 AMP dependent CoA ligase, putative
Length = 548
Score = 100 bits (250), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/54 (83%), Positives = 50/54 (92%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
YP+ EAGQVP+AFVVRQ G I+ESQIKDFIA+QVAPYKRIRRVIF+DSLPKNA
Sbjct: 474 YPDAEAGQVPMAFVVRQSGSTIDESQIKDFIAKQVAPYKRIRRVIFIDSLPKNA 527
>30190.m010972 AMP dependent CoA ligase, putative
Length = 540
Score = 84.0 bits (206), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/53 (64%), Positives = 45/53 (84%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
YPNEEAGQ+P+AF+V+Q +NE I DF+A+QVAPYK+IRRV FV+S+PK+
Sbjct: 466 YPNEEAGQIPIAFIVKQPQSSLNEKDIMDFVAKQVAPYKKIRRVAFVNSIPKS 518
>30170.m014327 AMP dependent CoA ligase, putative
Length = 549
Score = 81.6 bits (200), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Query: 2 LLLNRAQINLTRNI*MNRYPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIR 61
LLL A+I+ I +P++EAGQVP+A+VVR+ G ++ES + DF+A+QVAPYKRIR
Sbjct: 464 LLLTHAEISDAAVI---PFPDKEAGQVPMAYVVRKAGSNLSESSVMDFVARQVAPYKRIR 520
Query: 62 RVIFVDSLPKN 72
RV F+ ++PKN
Sbjct: 521 RVTFIAAIPKN 531
>30147.m013769 AMP dependent CoA ligase, putative
Length = 549
Score = 77.4 bits (189), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 46/53 (86%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
Y +EEAGQ+P+A++VR+ G I E+++ DFIA+QVAPYK+IRRV F++++PK+
Sbjct: 475 YADEEAGQIPMAYIVRKPGSDITEAEVMDFIAKQVAPYKKIRRVAFINAIPKS 527
>29589.m001235 AMP dependent CoA ligase, putative
Length = 542
Score = 70.1 bits (170), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+P+ EAG+VPVA+VVR + E +++ +IA QVAP+KR+RRV F++++PK+A
Sbjct: 472 FPDAEAGEVPVAYVVRSPNSSLTEEEVQKYIADQVAPFKRLRRVTFINTVPKSA 525
>28872.m000246 AMP dependent CoA ligase, putative
Length = 572
Score = 68.2 bits (165), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+EEAGQ+P+A+VVR + E Q+ F+A QVAPYK++RRV F+ ++PK+A
Sbjct: 500 DEEAGQIPMAYVVRAASAELTEEQVIQFVASQVAPYKKVRRVSFISAIPKSA 551
>30078.m002285 AMP dependent CoA ligase, putative
Length = 543
Score = 68.2 bits (165), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 20 YPNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
+P+ +AG+VP+A+VVR + E ++ FIA+QVAP+KR+RRV F++S+PK+A
Sbjct: 473 FPDPKAGEVPIAYVVRSPNSSLTEEDVQKFIAEQVAPFKRLRRVTFINSVPKSA 526
>28429.m000109 AMP dependent CoA ligase, putative
Length = 557
Score = 65.1 bits (157), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNAP 74
+E AG++P AFVVR +G +I E ++ +I++QV YKRIRRV F DS+PK AP
Sbjct: 487 DEAAGEIPAAFVVRSNGSKITEDDVQQYISKQVIYYKRIRRVFFTDSIPK-AP 538
>30068.m002672 AMP dependent CoA ligase, putative
Length = 517
Score = 60.1 bits (144), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNA 73
++E G++PVAFVV++ + + I +++A QVAP+K++R+VIFV S+PK+A
Sbjct: 449 DKECGEIPVAFVVKRLESMLTQEDIINYVAVQVAPHKKVRKVIFVQSIPKSA 500
>30131.m006921 AMP dependent CoA ligase, putative
Length = 544
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKNAP 74
+E AG+VPVAFVVR I E +IK +I +QV YKRI RV FV+++PK AP
Sbjct: 474 DEGAGEVPVAFVVRPDKSNITEDEIKQYIYKQVVFYKRISRVFFVEAIPK-AP 525
>30073.m002251 AMP dependent CoA ligase, putative
Length = 573
Score = 58.9 bits (141), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 22 NEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
+E AG+VPVAFVVR +G ++E +K++IA+QV YK++ +V F+ ++PK+
Sbjct: 502 DEVAGEVPVAFVVRSNGFELSEEDVKEYIAKQVVFYKKLHKVYFIHAIPKS 552
>29929.m004640 AMP dependent CoA ligase, putative
Length = 599
Score = 51.6 bits (122), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 21 PNEEAGQVPVAFVVRQHGRRINESQIKDFIAQQVAPYKRIRRVIFVDSLPKN 72
P+EEAG++P A VV + +E I +++A VA YK++R V FVD++PK+
Sbjct: 516 PDEEAGEIPAACVVINQEAKESEEDILNYVADNVAHYKKVRVVQFVDTIPKS 567