Jatropha Genome Database
- JcCA0192731.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0192731.20 + phase: 0 /partial
(209 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28256.m000140 Protein AFR, putative 271 1e-73
30174.m009020 Protein AFR, putative 75 2e-14
29929.m004667 Protein AFR, putative 72 1e-13
29908.m005976 conserved hypothetical protein 72 2e-13
29195.m000051 conserved hypothetical protein 67 8e-12
29835.m000632 Protein AFR, putative 65 2e-11
28320.m001108 Protein AFR, putative 64 7e-11
29693.m001994 Protein AFR, putative 60 1e-09
29977.m000256 conserved hypothetical protein 48 4e-06
29883.m002027 conserved hypothetical protein 47 5e-06
>28256.m000140 Protein AFR, putative
Length = 370
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/197 (71%), Positives = 156/197 (79%)
Query: 13 PILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLLCSQPFLYVS 72
P+LIP+LP+DI+LNILAR+PRSHHPLLSLVSK F S+FSS LFY TRSLL SQPFLY+S
Sbjct: 17 PLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFSQPFLYLS 76
Query: 73 IRIPTTSSLHWFTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALVAVGPKIYVIGGCLKDI 132
IR TSSL WFTL+QNSPN GSA V++G KIYVIGGCL DI
Sbjct: 77 IRFAITSSLRWFTLYQNSPNPKNPPNFLVQLLPTPSPLVGSATVSLGHKIYVIGGCLNDI 136
Query: 133 PSSHVWTLDCRFHSWESFPNMSISREFAAAGVVDGKIYVIGGCVVDTWARSKNWAEVFDP 192
PSSHVWTLDCRFH WE P MSISREFAAAGVV+ KIYVIGGCVVDT+ARSK WAEVFDP
Sbjct: 137 PSSHVWTLDCRFHMWELSPKMSISREFAAAGVVNDKIYVIGGCVVDTFARSKYWAEVFDP 196
Query: 193 KIRTWESVDSARENILR 209
I TWE++DS RE++LR
Sbjct: 197 NIETWEAIDSVREHLLR 213
>30174.m009020 Protein AFR, putative
Length = 353
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 1 MSATTSASQEPAPILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRS 60
M + +E LI LP+DI L LAR+PR +H +L V + +R + S + R
Sbjct: 1 MDFKNHSIEEGQAQLIRGLPDDIVLFCLARVPRKYHTVLKCVCRRWRDLVCSEEWRAYRM 60
Query: 61 LLLCSQPFLYVSIR----------IPTTSSLHWFTLFQNSPNXXXXXXXXXXXXXXXXXX 110
S+ ++Y R + SS + L Q P+
Sbjct: 61 KHNLSETWIYALCRDKFDQICCYVLDPDSSRRCWKLIQGLPS-------------HCLKR 107
Query: 111 XGSALVAVGPKIYVIGGC--LKDIPSSHVWTLDCRFHSWESFPNMSISREFAAAGVVDGK 168
G A+G K+Y +GGC L+D + + D +SW ++S +R + A V+DGK
Sbjct: 108 KGMGFEALGKKLYFLGGCGWLED-ATDEAYCYDVSRNSWTEATSLSTARCYFACEVMDGK 166
Query: 169 IYVIGGCVVDTWARSKNWAEVFDPKIRTWESVDSA 203
IY IGG + + +W + FD WES A
Sbjct: 167 IYAIGG-LGSKLSDPHSW-DTFDAHKNCWESHSDA 199
>29929.m004667 Protein AFR, putative
Length = 391
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 12 APILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLLCSQPFLYV 71
+PIL P LP+D+A LA +PR + P + V K +RS S F R L + LYV
Sbjct: 53 SPIL-PGLPDDVAKYCLALVPRPYFPSMGAVCKKWRSFMKSKEFLVVRKLAGLLEELLYV 111
Query: 72 SIRIPTTSSLHWFTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALVAVGPKIYVIGGC--- 128
+ W L G +VA+ K+ V+ G
Sbjct: 112 LTVDSEGTQSQWEVL-------DCLGQRRQLPLMPGSVKAGFGVVALNGKLLVMAGYSVI 164
Query: 129 -LKDIPSSHVWTLDCRFHSWESFPNMSISREFAAAGVVDGKIYVIGGCVVDTWARSKNWA 187
S+ V+ D +SW +M+++R A V+GK+Y +GG VD S + A
Sbjct: 165 DGTGSASADVYEYDSCLNSWSKLSSMNVARYDFACAEVNGKVYAVGGYGVD--GDSLSSA 222
Query: 188 EVFDPKIRTWESVDSAR 204
E +DP + W ++S R
Sbjct: 223 ETYDPDTKKWTLIESLR 239
>29908.m005976 conserved hypothetical protein
Length = 471
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 94/234 (40%), Gaps = 36/234 (15%)
Query: 4 TTSASQEPAPILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLL 63
TTS+ + P LIPSLP+++++ ILA++PRS++ L LVS+ ++ S + R L
Sbjct: 31 TTSSFCDDRPRLIPSLPDELSIQILAKIPRSYYFNLRLVSRKWKETIMSNELFKLRKELG 90
Query: 64 CSQPFLYVSIRIPTTSSLH--------WFTLFQNSPNXXXXXXXX--------------- 100
++ +LYV ++ S H W L Q PN
Sbjct: 91 LTEEWLYVLTKVEDELSWHALEPLSRTWQRLPQ-MPNVYAEESRNSSSGLWLWNVVGQRI 149
Query: 101 -----------XXXXXXXXXXXGSALVAVGPKIYVIGGCLKDIPSSHVWTLDCRFHSWES 149
G A+ AV +YV+GG K S VW D + W
Sbjct: 150 RIAETIRTWLGQKQALNQMPFCGCAIGAVDGCLYVLGGFFKASTISCVWRYDPILNRWSE 209
Query: 150 FPNMSISREFAAAGVVDGKIYVIGGC-VVDTWARSKNWAEVFDPKIRTWESVDS 202
M R + +++ K+YV+GG + AEVFDP W V S
Sbjct: 210 VTPMYTGRAYCKTSILNDKLYVVGGVSQLGGGLIPLQSAEVFDPCTDKWSEVPS 263
>29195.m000051 conserved hypothetical protein
Length = 469
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 33/220 (15%)
Query: 15 LIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLLCSQPFLYVSIR 74
LIPSLP++I++ ILAR+PR + + LVS+ +++ S + R L ++ +LY+ +
Sbjct: 39 LIPSLPDEISIQILARIPRICYLKMKLVSRAWKAAIVSTELFNVRKELGTTEEWLYLLTK 98
Query: 75 IPTTSSLHWFTL-----------------FQNSPNXXXXXXXXXXXXXXXXXXX------ 111
+ L W+ L F++ P
Sbjct: 99 VEDDKFL-WYALDPLSRRWQRLPIMPGVSFEDEPGKGIWNVVGSSVKIADTVRGWFVKKG 157
Query: 112 --------GSALVAVGPKIYVIGGCLKDIPSSHVWTLDCRFHSWESFPNMSISREFAAAG 163
GSA+ A+ +YV+GG K VW + ++W MS R F G
Sbjct: 158 QQAPLPFHGSAVGAIDGCLYVLGGLSKASAVRCVWQYNPVLNAWSEMSPMSTGRAFCKTG 217
Query: 164 VVDGKIYVIGGCVVDTWAR-SKNWAEVFDPKIRTWESVDS 202
+++ K+Y +GG S AEVFDP W + S
Sbjct: 218 ILNKKLYAVGGVTRGRGGLISLQSAEVFDPHTGVWSEIPS 257
>29835.m000632 Protein AFR, putative
Length = 437
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 13 PILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLLCSQPFLYVS 72
P L+P LP+D+A+ L R+PR+ H L LV K + + + FY+ R L ++ ++YV
Sbjct: 75 PPLLPGLPDDLAIACLIRVPRAEHRKLRLVCKRWYRLLAGNFFYSLRKSLGMAEEWVYV- 133
Query: 73 IRIPTTSSLHW------FTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALVAVGPKIYVIG 126
I+ + W + L+Q P G A+++ G +Y+ G
Sbjct: 134 IKRDRDGKISWNAFDPIYQLWQPLP--------PVPREYSEALGFGCAVLS-GCHLYLFG 184
Query: 127 GCLKD---IPSSHVWTLDCRFHSWESFPNMSISREFAAAGVVDGKIYVIGGCVVDTWARS 183
G KD V R + W P+M R F + V++ +YV GG + R+
Sbjct: 185 G--KDPLRGSMRRVIFYSARTNKWHRAPDMLRKRHFFGSCVINNCLYVAGG-ECEGIQRT 241
Query: 184 KNWAEVFDPKIRTW 197
AEV+DP W
Sbjct: 242 LRSAEVYDPNKNRW 255
>28320.m001108 Protein AFR, putative
Length = 436
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 3 ATTSASQEPAPILIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLL 62
S +Q P L+P LP+D+A+ L R+PR H L LV K + + + FY+ R L
Sbjct: 66 GDRSRNQSP---LLPGLPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLAGNFFYSLRKSL 122
Query: 63 LCSQPFLYVSIRIPTTSSLHW------FTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALV 116
++ ++Y+ I+ + W + ++Q P G A++
Sbjct: 123 GIAEEWIYI-IKRDRDGKISWHAFDPVYQIWQPLP--------PVPKEYSEALGFGCAVL 173
Query: 117 AVGPKIYVIGGCLKDIPSS---HVWTLDCRFHSWESFPNMSISREFAAAGVVDGKIYVIG 173
+ G +Y+ GG KD V R + W P+M R F + V++ +YV G
Sbjct: 174 S-GCHLYLFGG--KDPLKGSMRRVIFYSARTNKWHRAPDMLRRRHFFGSCVINNCLYVAG 230
Query: 174 GCVVDTWARSKNWAEVFDPKIRTW 197
G D RS AEV+DP W
Sbjct: 231 G-ENDGGHRSLRSAEVYDPNKNRW 253
>29693.m001994 Protein AFR, putative
Length = 465
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 82/196 (41%), Gaps = 6/196 (3%)
Query: 15 LIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSA-LFYTTRSLLLCSQPFLYVSI 73
IP LP+D+ALN L RLP H V K + + + F+T R L + P+LYV
Sbjct: 112 FIPGLPDDVALNCLLRLPVQSHASCRAVCKRWHLLLGNKERFFTRRKELGFNDPWLYVFA 171
Query: 74 RIPTTSSLHWFTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALVAVGPKIYVIGGCLKDI- 132
T + W L + A + + ++V GG + D+
Sbjct: 172 FRKCTGKIQWQVL-DLTHFLWHTIPAMPCKDKVCPHGFRCASIPLDGTLFVCGGMVSDVD 230
Query: 133 -PSSHVWTLDCRFHSWESFPNMSISREFAAAGVVDGKIYVIGGCVVDTWARSKNWAEVFD 191
P V + + + W M +R F A+ ++G IYV GG D + AEVFD
Sbjct: 231 CPLDLVLKYEMQKNRWTVMNQMIAARSFFASAAINGMIYVAGGNSTDLFELDS--AEVFD 288
Query: 192 PKIRTWESVDSARENI 207
P W+S+ S N+
Sbjct: 289 PVKGNWQSIASMGTNM 304
>29977.m000256 conserved hypothetical protein
Length = 203
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 140 LDCRFHSWESFPNMSISREFAAAGVVDGKIYVIGGCVVDTWARSKNWAEVFDPKIRTWES 199
L+ + W++ P+M R FA K YV+GG + T S AE++DPK +W+
Sbjct: 5 LNLKTWEWQTLPDMQNQRAFATGAAHRNKFYVVGGSTIATLKHS---AEIYDPKTNSWKF 61
Query: 200 VDS 202
V+S
Sbjct: 62 VNS 64
>29883.m002027 conserved hypothetical protein
Length = 428
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 15 LIPSLPNDIALNILARLPRSHHPLLSLVSKPFRSVFSSALFYTTRSLLLCSQPFLYVSIR 74
LIP LPND+A IL+ +P SHH + SK + + SS + R LL L + +
Sbjct: 26 LIPGLPNDVAAQILSTVPYSHHSRIKQTSKSWYTFLSSKTLVSLRQHLLNLNHLLVIFPQ 85
Query: 75 IPTTSSLHWFTLFQNSPNXXXXXXXXXXXXXXXXXXXGSALVAVGPKIYVIGGCLKD--- 131
P+ SS + F + N +++GP +YV+GG D
Sbjct: 86 DPSISSPYLF----DPKNLAWKPLLPMPCNPHVYGLCNFTSISLGPTLYVLGGSHFDTRS 141
Query: 132 ------IPSSHVWTLDCRFHSWESF-PNMSISREFAAAGVVD-GKIYVIGG 174
PSS V+ + W+ P +S FA V + GKI V GG
Sbjct: 142 FPMDRPTPSSSVFRYNFIDSRWDQLSPMLSPRGSFACIAVPNSGKIIVAGG 192