Jatropha Genome Database

JcCA0155261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155261.10 + phase: 0 
         (371 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29877.m000468 d-alanyl-d-alanine carboxypeptidase, putative           610   e-175

>29877.m000468 d-alanyl-d-alanine carboxypeptidase, putative
          Length = 370

 Score =  610 bits (1572), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 306/374 (81%), Positives = 332/374 (88%), Gaps = 7/374 (1%)

Query: 1   MDADTTDTQPEPVSLSSDPLSNQFGSLNDLAHELASLQDLANRGSWRSILDKVARARSLA 60
           MD++T D Q   V +++DPLS+QF SLNDLAHELASLQDLA RGSWRSILDKV RARSL+
Sbjct: 1   MDSNTVDPQ---VPVATDPLSDQFTSLNDLAHELASLQDLATRGSWRSILDKVTRARSLS 57

Query: 61  LLTTPHDHLTYLAYNVLAFVKLRRFKDALTELDSVDDFDSHHYRYETYPKIYPHRHGSMV 120
           LL TPHDHLTYLAYNVLA  KLRRFKDALTELDS+DDFDSHHY Y+TYPKIYP+R GSMV
Sbjct: 58  LLNTPHDHLTYLAYNVLALSKLRRFKDALTELDSLDDFDSHHYFYQTYPKIYPNRSGSMV 117

Query: 121 PFSLRWLHAVIPLKLGNRQEGLDRFYILLDFVRGKLK-EKQGFDFSSKIWRNREVFVMNW 179
           PF LRWLHA+IPLKLGNRQ+GLDRFY+LLDFVR K+K +KQ  D + K+WR REVFVMN 
Sbjct: 118 PFCLRWLHALIPLKLGNRQDGLDRFYLLLDFVREKVKVKKQENDVAVKMWRKREVFVMNG 177

Query: 180 IISEHLKNKEFTICLDLIKDLVSR--GNFDPVLLSKLGCIQMQIGDLEGAKGSFEKVEKL 237
           II+EHLKNKEF++CL LI DL+S   GN DPVLLSKLG IQMQIGDLEGAK SF+ VEKL
Sbjct: 178 IITEHLKNKEFSVCLGLINDLISHSGGNLDPVLLSKLGHIQMQIGDLEGAKMSFDNVEKL 237

Query: 238 LEERIAGGSDESLSEVEFRNLVNRNKALVYLVGKDYVSAVREYEECIDRDPMDVVAINNK 297
             ER   G DE LSE+EFRNL+NRNKALVYLVGKDYVSAVREYEECI+RD  DVVAINNK
Sbjct: 238 FNERNVDG-DELLSEIEFRNLINRNKALVYLVGKDYVSAVREYEECIERDATDVVAINNK 296

Query: 298 ALCLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIA 357
           ALCLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWI+
Sbjct: 297 ALCLMYLRDLSDSIKVLENSLERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSNWIS 356

Query: 358 RVAPDDFDSSSTRI 371
           RVAPDDFDSS TRI
Sbjct: 357 RVAPDDFDSSCTRI 370