Jatropha Genome Database

JcCA0155011.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0155011.20 + phase: 0 
         (334 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m010932 metalloendopeptidase, putative                          590   e-169

>30190.m010932 metalloendopeptidase, putative
          Length = 338

 Score =  590 bits (1520), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 296/344 (86%), Positives = 313/344 (90%), Gaps = 16/344 (4%)

Query: 1   MASVPLSSLCL-PQRKLSSLSFSFGISDNLRSGLASVGFNSGKKNSGVRFSICRAAA--- 56
           MASVP+SSLCL  QRKLS + FS+G+  NL S     GF+S KKN G+  SICRAA+   
Sbjct: 1   MASVPISSLCLLTQRKLSCVGFSYGVYYNLESN----GFSSVKKNRGI--SICRAASSSS 54

Query: 57  ------VVFRDLDADDFRHPLDKQNTLLLRAIPGLNELGKALLGSMTEQIMLLENIGTSV 110
                 VVFRDLDADDFRHPLDKQNTLLLRAIPGLNE+GKALLGSMTEQ+MLLENIGTSV
Sbjct: 55  SSSSSSVVFRDLDADDFRHPLDKQNTLLLRAIPGLNEIGKALLGSMTEQVMLLENIGTSV 114

Query: 111 LVSKNQLYELHQLMTEAAEILNLEPPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELL 170
           LVSKNQL ELHQLMTEAA ILNLE PDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELL
Sbjct: 115 LVSKNQLSELHQLMTEAAAILNLEAPDLYVRQSPVPNAYTLAISGKKPFVVVHTSLVELL 174

Query: 171 TRKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTLPGLGQLIAQSLEEQLFRWLRAAE 230
           TRKELQAVLAHELGHLKCDHGVWLTFANILTLGAYT+PGLG+LIAQ+LEEQLFRWLRAAE
Sbjct: 175 TRKELQAVLAHELGHLKCDHGVWLTFANILTLGAYTVPGLGRLIAQTLEEQLFRWLRAAE 234

Query: 231 LTCDRAALLVAQDPKVVISVLMKLAGGSPSVADQLNVDAFLEQARSYDKASSSPMGWYIR 290
           LTCDRAALLVAQDPKVVISVLMKLAGGSPS+ADQLNVDAFLEQARSYDKASSSP+GWYIR
Sbjct: 235 LTCDRAALLVAQDPKVVISVLMKLAGGSPSIADQLNVDAFLEQARSYDKASSSPIGWYIR 294

Query: 291 NAQTRQLSHPLPVLRAREIDEWSRSREYRTLLKRALERNAVQNV 334
           NAQTRQLSHPLPVLRAREIDEWSRS+EYRTLL+RA + N VQNV
Sbjct: 295 NAQTRQLSHPLPVLRAREIDEWSRSQEYRTLLQRATQMNVVQNV 338