Jatropha Genome Database

JcCA0154831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154831.10 + phase: 0 
         (295 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27704.m000147 cholinephosphate cytidylyltransferase, putative         465   e-132
29843.m000285 conserved hypothetical protein                          110   1e-24
30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative   106   1e-23

>27704.m000147 cholinephosphate cytidylyltransferase, putative
          Length = 298

 Score =  465 bits (1197), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 222/260 (85%), Positives = 230/260 (88%)

Query: 1   MEEEKVKTADPPEDRPVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITRK 60
           MEEEKVK A+PP DRPVRVYADGIYDLFHFGHARSLEQAKK FPNTYLLVGCCNDEIT K
Sbjct: 1   MEEEKVKIAEPPNDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDEITHK 60

Query: 61  YKGKTVMTDQERYESLRHCRWVDEVIPDAPWVLTPEFLDKHQIDYVAHDSLPYADATGAG 120
           YKGKTVM DQERYESLRHC+WVDEVIPDAPWVLT EFLDKH+IDYVAHDSLPYADA+GAG
Sbjct: 61  YKGKTVMNDQERYESLRHCKWVDEVIPDAPWVLTQEFLDKHRIDYVAHDSLPYADASGAG 120

Query: 121 KDVYEFVKAIGKFKETKRTDGISTSDIIMRIVKDYNEYVMRNLARGYSRKELGVSYVKEK 180
            DVYEFVK+IGKFKETKRT+GISTSDIIMRIVKDYNEYVMRNLARGYSRKELGVSYVKEK
Sbjct: 121 NDVYEFVKSIGKFKETKRTEGISTSDIIMRIVKDYNEYVMRNLARGYSRKELGVSYVKEK 180

Query: 181 RLRAHMXXXXXXXXXXXXXXXXXXXIQIVAKTATVHRNEWVENADRLVAGFLEMFEERCH 240
           RLRAHM                   IQ VA TA VHRNEWVENADRLVAGFLEMFEERCH
Sbjct: 181 RLRAHMGLKKLQEKVKKQQEKVGEKIQTVATTARVHRNEWVENADRLVAGFLEMFEERCH 240

Query: 241 KMGTAIRDRIQEHLRKQQLI 260
           KMGTAIRDRIQE L+KQQL+
Sbjct: 241 KMGTAIRDRIQEQLKKQQLL 260


>29843.m000285 conserved hypothetical protein
          Length = 387

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 85/140 (60%), Gaps = 8/140 (5%)

Query: 17  VRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITRKYKGKTVMTDQERYESL 76
           +RVY DG +DL H+GHA +L QAK L     L+VG  +DE     KG  V+  +ER   +
Sbjct: 30  IRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLPMEERLALV 87

Query: 77  RHCRWVDEVIPDAPWVLTPEFLDK----HQIDYVAHDSLPYADATGAGKDVYEFVKAIGK 132
              +WVDEVI +AP+ +T +F+++    H+IDY+ H   P     G   D Y   K  G+
Sbjct: 88  SGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGR 145

Query: 133 FKETKRTDGISTSDIIMRIV 152
           +K+ KRT+G+S++DI+ RI+
Sbjct: 146 YKQIKRTEGVSSTDIVGRIL 165



 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 19  VYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITRKYKGK--TVMTDQERYESL 76
           VY DG +DLFH GH   L  A++L    +LLVG   D+I  +++G+   +M   ER  S+
Sbjct: 223 VYIDGAFDLFHAGHVEILRSARQL--GDFLLVGIHTDQIVSEHRGEHYPIMHLHERSLSV 280

Query: 77  RHCRWVDEVIPDAPWVLTPEFLDKHQIDYVAHDSLPYADATGAG-KDVYEFVKAIGKFKE 135
             CR+VDEVI  APW ++ + +    I  V H ++   ++  AG  D Y   K++G F+ 
Sbjct: 281 LACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTVAECNSLLAGISDPYAVPKSMGIFRT 340

Query: 136 TKRTDGISTSDIIMRIVKDYNEYVMRNLARGYSRKE 171
            +    I TS +  RIV ++  Y+ RN  +  S K+
Sbjct: 341 LESPKNIITSSVAQRIVANHEAYMKRNSKKAKSEKK 376


>30073.m002201 Ethanolamine-phosphate cytidylyltransferase, putative
          Length = 418

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 18/168 (10%)

Query: 17  VRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITRKYKGKTVMTDQERYESL 76
           +RVY DG +D+ H+GH  +L QA+ L     L+VG  +D      KG  V    ER   +
Sbjct: 55  IRVYMDGCFDMMHYGHCNALRQARAL--GDELVVGVVSDAEIIANKGPPVTPLHERMIMV 112

Query: 77  RHCRWVDEVIPDAPWVLTPEFLDK----HQIDYVAHDSLPYADATGAGKDVYEFVKAIGK 132
              +WVDEVIPDAP+ +T EF+ K    + IDY+ H   P     G   D Y   K  G+
Sbjct: 113 NAVKWVDEVIPDAPYAITEEFMKKLFEEYNIDYIIHGDDPCVLPDGT--DAYALAKKAGR 170

Query: 133 FKETKRTDGISTSDIIMRIV----------KDYNEYVMRNLARGYSRK 170
           +K+ KRT+G+S++DI+ R++             N  + R  + G+S+K
Sbjct: 171 YKQIKRTEGVSSTDIVGRMLLCTRERSISDSHKNSSLQRQFSHGHSQK 218



 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 19  VYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITRKYKG--KTVMTDQERYESL 76
           VY DG +DLFH GH   L  A+ L    +LLVG  ND+     +G  + +M   ER  S+
Sbjct: 254 VYIDGAFDLFHAGHVEILRVARGL--GDFLLVGIHNDQTVSARRGAHRPIMNLHERSLSV 311

Query: 77  RHCRWVDEVIPDAPWVLTPEFLDKHQIDYVAHDSL 111
             CR+VDEVI  APW ++ + +    I  V H ++
Sbjct: 312 LACRYVDEVIIGAPWEVSKDMITTFNIFLVVHGTV 346