Jatropha Genome Database

JcCA0154801.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154801.30 + phase: 0 
         (68 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007261 conserved hypothetical protein                           71   1e-13
30131.m007260 conserved hypothetical protein                           65   6e-12
30131.m007262 conserved hypothetical protein                           64   1e-11

>30131.m007261 conserved hypothetical protein
          Length = 220

 Score = 70.9 bits (172), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/62 (61%), Positives = 45/62 (72%), Gaps = 6/62 (9%)

Query: 1   MNKFGKKAENFAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           MNK G+KA+N AQ +REHV        T K K +LG KILQVG V+KIF+QLFRV E+EK
Sbjct: 51  MNKLGRKADNIAQGIREHVRLGSNISQTVKGKFSLGAKILQVGGVEKIFKQLFRVGEDEK 110

Query: 55  LL 56
           LL
Sbjct: 111 LL 112


>30131.m007260 conserved hypothetical protein
          Length = 237

 Score = 65.1 bits (157), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/62 (58%), Positives = 44/62 (70%), Gaps = 6/62 (9%)

Query: 1   MNKFGKKAENFAQVVREHVG------ATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           MNK GKKA+ FA  +REHV        T K K++LG +ILQVG V+KI+RQLF VKE E+
Sbjct: 59  MNKLGKKADKFAHGIREHVKLGTKITETLKGKLSLGARILQVGGVKKIYRQLFNVKEGER 118

Query: 55  LL 56
           LL
Sbjct: 119 LL 120


>30131.m007262 conserved hypothetical protein
          Length = 215

 Score = 63.9 bits (154), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 6/63 (9%)

Query: 1   MNKFGKKAENFAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           +NK GKKA+ FA  +REHV        T K K+ LG KILQVG +++ FRQLF V E+EK
Sbjct: 45  INKLGKKADIFASCIREHVRLGPKITETVKGKLRLGAKILQVGGLERTFRQLFTVTEDEK 104

Query: 55  LLN 57
            LN
Sbjct: 105 FLN 107