Jatropha Genome Database
- JcCA0154801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0154801.10 + phase: 0
(198 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30131.m007263 DNA binding protein, putative 194 3e-50
30174.m008717 DNA binding protein, putative 142 1e-34
29681.m001296 DNA binding protein, putative 107 3e-24
28288.m000014 DNA binding protein, putative 105 1e-23
30155.m001616 DNA binding protein, putative 103 6e-23
30055.m001589 DNA binding protein, putative 103 7e-23
29610.m000410 DNA binding protein, putative 93 9e-20
29794.m003333 conserved hypothetical protein 93 9e-20
29912.m005387 conserved hypothetical protein 92 1e-19
30147.m014337 conserved hypothetical protein 91 4e-19
30146.m003509 DNA binding protein, putative 87 4e-18
29736.m002089 transcription factor, putative 81 3e-16
30147.m014028 DNA binding protein, putative 76 1e-14
30174.m009110 hypothetical protein 62 2e-10
>30131.m007263 DNA binding protein, putative
Length = 295
Score = 194 bits (492), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 99/135 (73%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG
Sbjct: 129 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 188
Query: 87 NGDISAPQGPITGQTNXXXXXXXXXXXXXQPPQHXXXXXXXXXXXXXXXXXXXXXXLVSA 146
NGDISAPQGPITGQTN PPQH LVSA
Sbjct: 189 NGDISAPQGPITGQTNGSAGGGSAGKATKHPPQHPAGSPGVGVYGSPTIGQPIGGPLVSA 248
Query: 147 VGTPVNLPAPAHMAY 161
VGTPVNLPAPAHMAY
Sbjct: 249 VGTPVNLPAPAHMAY 263
>30174.m008717 DNA binding protein, putative
Length = 297
Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 84/130 (64%), Gaps = 3/130 (2%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFLLGLDK+GKGDWRSISRNFV++RTPTQVASHAQKYFIRLNSMN+DRRRSSIHDITSV
Sbjct: 141 LFLLGLDKFGKGDWRSISRNFVLSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVN 200
Query: 87 NGDISAPQGPITGQ---TNXXXXXXXXXXXXXQPPQHXXXXXXXXXXXXXXXXXXXXXXL 143
NG++S+ Q PITGQ TN QH +
Sbjct: 201 NGEVSSHQAPITGQQGNTNPAAGAPAMGSAVKHRAQHHMPSIGMYGAPVGHPVAAPPGHM 260
Query: 144 VSAVGTPVNL 153
SAVGTPV L
Sbjct: 261 ASAVGTPVML 270
>29681.m001296 DNA binding protein, putative
Length = 307
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 57/67 (85%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFL+GL KYGKGDWR+ISRNFVVTRTPTQVASHAQKYFIR S KD+RR+SIHDIT+V
Sbjct: 143 LFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVN 202
Query: 87 NGDISAP 93
+I P
Sbjct: 203 LNEIRTP 209
>28288.m000014 DNA binding protein, putative
Length = 307
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVGN 87
FL+GL KYGKGDWR+ISRNFV TRTPTQVASHAQKYFIR ++ KD+RRSSIHDIT+V
Sbjct: 147 FLMGLQKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQSTGGKDKRRSSIHDITTVNL 206
Query: 88 GDISAP 93
D +P
Sbjct: 207 PDTKSP 212
>30155.m001616 DNA binding protein, putative
Length = 240
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 59/69 (85%), Gaps = 2/69 (2%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN--KDRRRSSIHDITS 84
LFL+GL +YGKGDWRSISRN V+TRTPTQVASHAQKYF+R NSM+ K+R+RSSIHDIT+
Sbjct: 126 LFLIGLHRYGKGDWRSISRNVVITRTPTQVASHAQKYFLRQNSMSMKKERKRSSIHDITT 185
Query: 85 VGNGDISAP 93
V + + P
Sbjct: 186 VDDKPVPLP 194
>30055.m001589 DNA binding protein, putative
Length = 214
Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 55/61 (90%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
LFL+GL +YGKGDWRSISRN VV+RTPTQVASHAQKYF+RLNS+ K+++R SIHDIT+
Sbjct: 117 LFLIGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKYFLRLNSVKKEKKRPSIHDITTSA 176
Query: 87 N 87
N
Sbjct: 177 N 177
>29610.m000410 DNA binding protein, putative
Length = 288
Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLN-SMNKDRRRSSIHDITS-- 84
FLLGL K+GKGDWR+ISRNFVV++TPTQVASHAQKYFIR S KD+RR SIHDIT+
Sbjct: 132 FLLGLLKHGKGDWRNISRNFVVSKTPTQVASHAQKYFIRQQLSGVKDKRRPSIHDITTFN 191
Query: 85 VGNGDISAPQGP 96
+ N +IS P
Sbjct: 192 LTNANISEGNKP 203
>29794.m003333 conserved hypothetical protein
Length = 277
Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 48/58 (82%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
+FLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R NS NK +RR S+ D+ S
Sbjct: 120 IFLLGLQKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQNSFNKRKRRPSLFDMES 177
>29912.m005387 conserved hypothetical protein
Length = 285
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 49/55 (89%)
Query: 28 FLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDI 82
FL+GL+K GKGDWR IS+NFV TRTPTQVASHAQKYF+RL S+NK +RRSS+ D+
Sbjct: 120 FLIGLEKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRLASLNKKKRRSSLFDM 174
>30147.m014337 conserved hypothetical protein
Length = 333
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 53/68 (77%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVG 86
+FL GLDK GKGDWR IS+NFV TRTPTQVASHAQKYF+R ++ +K +RRSS+ D+T
Sbjct: 104 IFLEGLDKLGKGDWRGISKNFVTTRTPTQVASHAQKYFLRQSAADKKKRRSSLFDMTLRE 163
Query: 87 NGDISAPQ 94
+ S PQ
Sbjct: 164 SVLASQPQ 171
>30146.m003509 DNA binding protein, putative
Length = 381
Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 7 SCCSIDFLFQRLK---FDDCKGTLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 63
+ CS + +R K + + + LFL+GL K GKGDWR I+RN+VV+RTPTQVASHAQKY
Sbjct: 104 ASCSTNRRGERKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNYVVSRTPTQVASHAQKY 163
Query: 64 FIRLNSMNKDRRRSSIHDI 82
FIR + + +RRSS+ D+
Sbjct: 164 FIRQTNATRRKRRSSLFDM 182
>29736.m002089 transcription factor, putative
Length = 331
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 50/58 (86%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF+R N+ N+ RRRSS+ DIT+
Sbjct: 101 LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITT 158
>30147.m014028 DNA binding protein, putative
Length = 319
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/38 (89%), Positives = 34/38 (89%)
Query: 27 LFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYF 64
LFLLGL K GKGDWR ISRNFV TRTPTQVASHAQKYF
Sbjct: 116 LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 153
>30174.m009110 hypothetical protein
Length = 103
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Query: 36 GKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITS 84
DW+ S NFV TRTPTQ+A HAQKYF+R +++N+ RRRSS+ DIT+
Sbjct: 28 ASADWKGRSCNFVKTRTPTQIARHAQKYFLRHSNLNR-RRRSSLFDITT 75