Jatropha Genome Database

JcCA0154651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154651.10 + phase: 1 /partial
         (181 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013632 conserved hypothetical protein                          354   2e-98
28359.m000279 conserved hypothetical protein                          321   1e-88
29955.m001180 conserved hypothetical protein                          139   9e-34

>30170.m013632 conserved hypothetical protein
          Length = 762

 Score =  354 bits (908), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 158/181 (87%), Positives = 176/181 (97%)

Query: 1   SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
           SIMEP +RHLYTY+S+SGPQLGYLYSSNSLFNSGMWFMKKF+G QCIHQLTFTDDPNL+N
Sbjct: 582 SIMEPLQRHLYTYVSISGPQLGYLYSSNSLFNSGMWFMKKFKGNQCIHQLTFTDDPNLQN 641

Query: 61  TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
           TFFYRLCE+KTLENF+H+ILISSPQDGYVPYHSAR+ELCR+AS+DYSRKGR+FLEMLNNC
Sbjct: 642 TFFYRLCEKKTLENFKHVILISSPQDGYVPYHSARMELCRSASMDYSRKGRVFLEMLNNC 701

Query: 121 LDQIRAPTSQPRVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSFQELF 180
           LDQIRAPTS+ RVFMRCDVNFDTS++G+NFN+FIGR AHIEFLESDI+ RFIMWSFQELF
Sbjct: 702 LDQIRAPTSEQRVFMRCDVNFDTSSYGKNFNTFIGRAAHIEFLESDIYVRFIMWSFQELF 761

Query: 181 R 181
           R
Sbjct: 762 R 762


>28359.m000279 conserved hypothetical protein
          Length = 808

 Score =  321 bits (822), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 145/180 (80%), Positives = 165/180 (91%)

Query: 1   SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
           SIMEP+ R L TY+S+SGP LGYLYSSNSLFNSGMW +KK +G+QCIHQLTFTDDP+L+ 
Sbjct: 628 SIMEPYLRCLCTYVSISGPHLGYLYSSNSLFNSGMWLLKKLKGSQCIHQLTFTDDPDLRK 687

Query: 61  TFFYRLCEQKTLENFRHIILISSPQDGYVPYHSARIELCRAASLDYSRKGRIFLEMLNNC 120
           TF YRLCEQKTLENFRHIIL+SS QDGYVP+HSARIELC+AASLDYS+KG +FLEMLNNC
Sbjct: 688 TFMYRLCEQKTLENFRHIILLSSAQDGYVPHHSARIELCQAASLDYSKKGAVFLEMLNNC 747

Query: 121 LDQIRAPTSQPRVFMRCDVNFDTSNHGRNFNSFIGRTAHIEFLESDIFARFIMWSFQELF 180
           LDQIRAPTS+ R+FMRCDVNFDTS++GR+FN+ IGR AHIEFLESDIFA+FIMWSF E F
Sbjct: 748 LDQIRAPTSENRLFMRCDVNFDTSSYGRSFNALIGRAAHIEFLESDIFAKFIMWSFPEFF 807


>29955.m001180 conserved hypothetical protein
          Length = 688

 Score =  139 bits (349), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 57/85 (67%), Positives = 75/85 (88%)

Query: 1   SIMEPFRRHLYTYISLSGPQLGYLYSSNSLFNSGMWFMKKFRGTQCIHQLTFTDDPNLKN 60
            IMEP+ R+LYTYIS+SGP LGY+Y SNSLFNSG+W +K  +GTQCIHQLTF+DDP+L N
Sbjct: 603 GIMEPYLRYLYTYISISGPHLGYMYCSNSLFNSGLWLLKTLKGTQCIHQLTFSDDPDLMN 662

Query: 61  TFFYRLCEQKTLENFRHIILISSPQ 85
           TF Y+L +++TLENF++++L+SSPQ
Sbjct: 663 TFLYKLSKERTLENFKNVVLVSSPQ 687