Jatropha Genome Database

JcCA0154191.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.20 - phase: 0 /pseudo
         (623 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001216 sterol desaturase, putative                             755   0.0  
29709.m001214 sterol desaturase, putative                             687   0.0  
29783.m000308 sterol desaturase, putative                             257   1e-68

>29709.m001216 sterol desaturase, putative
          Length = 622

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/617 (58%), Positives = 463/617 (75%), Gaps = 8/617 (1%)

Query: 1   MATKPGFLTDWPWKNLGSFKYILVAPWVVHSLFSFAVNEESERDVAYLLIFPFLLLRVAH 60
           MA+ PG  ++WPWK LGSFK++++APWV++ ++S  V  E E + +YL IFPFLL R+ H
Sbjct: 1   MASMPGVFSEWPWKPLGSFKHVVLAPWVINHIYSIVVKGEKE-NPSYL-IFPFLLWRMVH 58

Query: 61  NLIWISYSRYRTAKGDNRIVDKGIEFEQVDRESNWDDQILFNALIFYIVYNTSSLAHHFP 120
           N +WIS SRYRTAKG+NRI+DKGIEF+QVDRE NWDDQ+L N ++FY+       A+  P
Sbjct: 59  NQLWISLSRYRTAKGNNRIIDKGIEFDQVDRERNWDDQVLLNGILFYVGAMVIPQANRMP 118

Query: 121 MWRSDGVILTILLHAGPVEFIYYWXXXXXXXXXXXXXXXXXXXXXIVTEPITSVIHPFAE 180
           MWR+D +I+TILLH GPVEF+YYW                     IVTEPITSVIHPFAE
Sbjct: 119 MWRADSIIITILLHIGPVEFLYYWFHRLLHHHYLYSRYHSHHHSSIVTEPITSVIHPFAE 178

Query: 181 HIAYFALFAIPLVTTLVTRTASVASFAGYITXIDLMNNMGHCNFELIPDSLFSVFPPLKY 240
           H+AYF LFAIPL+TT+++ TASVA++ GYIT ID MNNMGHCNFELIP S FS+FPPLKY
Sbjct: 179 HLAYFILFAIPLLTTVLSGTASVAAYCGYITYIDFMNNMGHCNFELIPKSFFSIFPPLKY 238

Query: 241 LMYTPTYHSLHHTQFRTNYSLFMPLYDYVYGTVDESSDTLYKASVERAEDSPDVVHLVHL 300
           LMYTP++HSLHHTQFRTNYSLFMP+YDY+YGT+D+SSD+LY++S++R E+   VVHL H+
Sbjct: 239 LMYTPSFHSLHHTQFRTNYSLFMPIYDYIYGTMDKSSDSLYESSLKRQEEIAHVVHLTHM 298

Query: 301 TTPDSIYHLQFGFACFASKPYSSKWYLRFMWPATL---LWSRICGRTFVSERNTFNTVKW 357
           TTPDSIYHL+ GFA  AS P SSKWYL  MWP TL   +++RI GRTF+ ER+ F+ ++ 
Sbjct: 299 TTPDSIYHLRLGFAYLASIPQSSKWYLWLMWPVTLWTMIFARIYGRTFLLERHRFDKLRL 358

Query: 358 QSWLVPRHKGQYLLKSQRDAINGMIEGAIKEADXXXXXXXXXXXXNQARGGAERKWQVYV 417
           Q+W++P++K QY ++ Q ++IN MIE +I EA+            NQ      R  + Y+
Sbjct: 359 QTWVIPKYKIQYTIQWQNESINKMIEQSILEAEAKGVKVLSLGLLNQGE-ELNRYGEAYM 417

Query: 418 ERNPCLRVKVVDGSSLAVAVVLNSIPRGTIQVLFRGNFTKVAYAVALALCQRGIQVTTVD 477
            ++P L +KVVDGSSLAVAVVLNSIP+GT Q+LFRG  +KVA+AV L LCQRGIQV T  
Sbjct: 418 VKHPRLGIKVVDGSSLAVAVVLNSIPKGTTQLLFRGRLSKVAFAVVLGLCQRGIQVATTL 477

Query: 478 KQEEEKLRKKLTTISPGCNNLIVHSTTCTQIWVVGDEVSKEEQMKASKGTLFIPYTQFPP 537
           K++ EKL K       G  N+++      + W+V D + +EEQ KASKGT+FIP +QFPP
Sbjct: 478 KEDYEKLIKASPNSECG-KNVLLSKNYSLKTWLVDDGLREEEQKKASKGTVFIPVSQFPP 536

Query: 538 KKWRKDCFYFTTPAMIIPKAFENMHSCENWLPRRVMSAWRIAGILHALEGWNVHECGDTT 597
           KK R DCFY++TPA++ P A EN+ SCENWLPRRVMSAWR AGI+H LEGWNV+ECG  T
Sbjct: 537 KKARNDCFYYSTPAVVAPSALENVDSCENWLPRRVMSAWRAAGIVHGLEGWNVNECG-YT 595

Query: 598 IFDVDKVWAASLRHGFR 614
           +FDVD+VW A+L HGF+
Sbjct: 596 MFDVDRVWQATLCHGFK 612


>29709.m001214 sterol desaturase, putative
          Length = 617

 Score =  687 bits (1774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/626 (54%), Positives = 448/626 (71%), Gaps = 18/626 (2%)

Query: 1   MATKPGFLTDWPWKNLGSFKYILVAPWVVHSLFSFAVNEESERDVAYLLIFPFLLLRVAH 60
           MA++PG LTDWPWK+LG FKY+++APWVVHS++SF V EE ERD+  +LIFP +LLR+ H
Sbjct: 1   MASRPGILTDWPWKSLGDFKYVILAPWVVHSIYSFVVKEEKERDLTSVLIFPSILLRLLH 60

Query: 61  NLIWISYSRYRTAKGDNRIVDKGIEFEQVDRESNWDDQILFNALIFYIVYNTSSLAHHFP 120
           N IWIS SRY+TAKG  R+VDK IEF+QVDRE +WDDQ+L   +I Y +    + A + P
Sbjct: 61  NQIWISVSRYQTAKGKKRVVDKCIEFDQVDRERDWDDQVLLYGIITYSINMGVAGASNMP 120

Query: 121 MWRSDGVILTILLHAGPVEFIYYWXXXXXXXXXXXXXXXXXXXXXIVTEPITSVIHPFAE 180
           +WR+DGV+LT++LHAGPVEF+YYW                     IVT+PI+SVIHPFAE
Sbjct: 121 IWRTDGVVLTMILHAGPVEFLYYWLHRALHHHYLYSRYHSHHHSSIVTQPISSVIHPFAE 180

Query: 181 HIAYFALFAIPLVTTLVTRTASVASFAGYITXIDLMNNMGHCNFELIPDSLFSVFPPLKY 240
            +AY+ LF IP++ ++ + TASVAS  GYI  ID MNN+GHCNFE+IP SLFS  PPLKY
Sbjct: 181 ILAYYLLFLIPILASIFSGTASVASAVGYIFYIDFMNNLGHCNFEIIPKSLFSFCPPLKY 240

Query: 241 LMYTPTYHSLHHTQFRTNYSLFMPLYDYVYGTVDESSDTLYKASVERAEDSPDVVHLVHL 300
           LMYTP++HSLHHTQFRTNYSLFMP YDY+YGT+D+  D L++AS+ + +DSP +VHL H 
Sbjct: 241 LMYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTMDKCCDQLHEASLAKPQDSPALVHLTHF 300

Query: 301 TTPDSIYHLQFGF--ACFASKPYSSKWYLRFMWPAT---LLWSRICGRTFVSERNTFNTV 355
           TTPDSIYHL+ GF          S+  +L   +P T   ++++   GR+FV+ERN+F  +
Sbjct: 301 TTPDSIYHLRLGFASLASRPSSSSASSFLWIFYPLTYLFMVFACFFGRSFVAERNSFKNL 360

Query: 356 KWQSWLVPRHKGQYLLKSQRDAINGMIEGAIKEADXXXXXXXXXXXXNQARGGAERKWQV 415
             Q+W++PR +  YLL+S+  AIN +IE AI EA+            NQA+    R  Q+
Sbjct: 361 VSQTWIIPRFRKHYLLESETTAINDLIEEAIAEAEARGSKVLSLGLLNQAK-ELNRNGQI 419

Query: 416 YVERNPCLRVKVVDGSSLAVAVVLNSIPRGTIQVLFRGNFTKVAYAVALALCQRGIQVTT 475
           Y+E++P L+VK+VDGSSLA AVV+NSIP+GT+QVL  G F KVA A+A ALC RG Q+  
Sbjct: 420 YIEKHPQLKVKLVDGSSLAAAVVINSIPKGTMQVLLNGKFNKVAKAIASALCLRGTQIVV 479

Query: 476 VDKQEEEKLRKKLTTISPGCNN--LIVHSTTCTQIWVVGDEVSKEEQMKASKGTLFIPYT 533
           +D++   K+         G  N  ++V  +   +IW+VGDE+S++EQ++A KGTLFIP+T
Sbjct: 480 LDEEGYGKV---------GLQNEKVMVSKSYDQKIWLVGDEISEKEQLQAPKGTLFIPFT 530

Query: 534 QFPPKKWRKDCFYFTTPAMIIPKAFENMHSCENWLPRRVMSAWRIAGILHALEGWNVHEC 593
           QFP ++ RKDCFY  TPAM+ P +  N+ SCENWLPRR MSAWRIAGI+HALE W V+EC
Sbjct: 531 QFPIRRIRKDCFYQITPAMLSPDSLHNLDSCENWLPRRAMSAWRIAGIIHALEEWKVNEC 590

Query: 594 GDTTIFDVDKVWAASLRHGFRSFNTI 619
           G+ +IF + +VW ASL HGFR  + +
Sbjct: 591 GE-SIFSIHRVWEASLHHGFRPLSIV 615


>29783.m000308 sterol desaturase, putative
          Length = 578

 Score =  257 bits (656), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 179/627 (28%), Positives = 277/627 (44%), Gaps = 78/627 (12%)

Query: 9   TDWPWKNLGSFKYILVAPWVVHSLFSFAVNEESERDVAYLLIFPFLLLRVAHNLIWISYS 68
           + W W+N G FKY+L  P +   + +    E   +D  +L I     LR    L+W  + 
Sbjct: 9   SSWAWENFGLFKYLLYGPLLAKVIHT-QTQELRLKDDWFLHILIISFLRSLVYLLWSCFV 67

Query: 69  RYRTAKGDNRIVDKGIEFEQVDRESNWDDQILFNALIFYIV-YNTSSLAHHFPMWRSDGV 127
                  + RI  +G +F+Q+DRE NWD+ +L  ALI  +  Y   SL  + P+W + G+
Sbjct: 68  SMLFLTYNRRINKQGYDFKQIDREWNWDNFVLLQALIGSMACYMFPSLIENVPLWNTKGL 127

Query: 128 ILTILLHAGPVEFIYYWXXXXXXXXXXXXXXXXXXXXXIVTEPITSVIHPFAEHIAYFAL 187
           I  ++LH    E +YYW                      V  P T     F EH+    +
Sbjct: 128 IAMLMLHVLISEPVYYWVHRYFHGSYLFPHYHSIHHSSPVLHPFTGAHASFLEHLILATV 187

Query: 188 FAIPLVTTLVTRTASVASFAGYITXIDLMNNMGHCNFELIPDSLFSVFPPLKYLMYTPTY 247
             IP++ +L+    S+     Y+   D +  +GH N E++P  LF   P L+YL YTP+Y
Sbjct: 188 IGIPIIGSLIMGYGSIVMIYAYVWAFDFLRCLGHSNVEIVPHQLFHSLPFLRYLFYTPSY 247

Query: 248 HSLHHTQFRTNYSLFMPLYDYVYGTVDESSDTLYKASVERAEDS---PDVVHLVHLTTPD 304
           HSLHHT+  TN+ LFMPL+D ++ T++  S  L++     A D    PD V L H+    
Sbjct: 248 HSLHHTEMGTNFCLFMPLFDAIWNTLNRKSWELHREMSTNAADKGRVPDFVFLAHVVDIS 307

Query: 305 SIYHLQFGFACFASKPYSSKWYLRFMWPATLL-----WSRICGRTFVSERNTFNTVKWQS 359
           S  H  F     AS  ++    +   WP   L     W++   + F+            +
Sbjct: 308 SAMHAPFVNRAVASNAFTPWNIMLPGWPVAFLVMLIMWAK--AKIFLVSFYNLRGRLHAT 365

Query: 360 WLVPRHKGQYLLKSQRDAINGMIEGAIKEADXXXXXXXXXXXXNQAR---GGAERKWQVY 416
           W VPR   QY L   ++ IN  IE AI  AD            N+     GG      ++
Sbjct: 366 WAVPRFGFQYFLPFAQEGINNHIEDAILRADREGVKVISLAALNKNEALNGGG----TLF 421

Query: 417 VERNPCLRVKVVDGSSLAVAVVLNSIPRGTIQVLFRGNFTKVAYAVALALCQRGIQV--T 474
           V ++P LRV+VV G++L  AV+LN I +   +V   G  +K+  A+AL LC+R ++V   
Sbjct: 422 VNKHPDLRVRVVHGNTLTAAVILNEISKDVTEVFLTGATSKLGRAIALYLCRRKVRVLML 481

Query: 475 TVDKQEEEKLRKKLTTISPGCNNLIVHSTTCTQIWVVGDEVSKEEQMKASKGTLFIPYTQ 534
           T+  +  +K++K+       C + +V             +V+K +  +  K T       
Sbjct: 482 TLSTERFQKIQKEAPL---DCQSYLV-------------QVTKYQAAQNCKYT------- 518

Query: 535 FPPKKWRKDCFYFTTPAMIIPKAFENMHSCENWLPRRVMSAWRIAGILHALEGWNVHECG 594
                                            + R V+ A    G++H LEGW+ HE G
Sbjct: 519 ---------------------------------MDRGVVHACHAGGVVHLLEGWSHHEVG 545

Query: 595 DTTIFDVDKVWAASLRHGFRSF-NTIN 620
              +  +D VW A+L+HG +   N IN
Sbjct: 546 AIDVDRIDLVWNAALKHGLKPVSNVIN 572