Jatropha Genome Database

JcCA0154191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154191.10 + phase: 0 /partial
         (169 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001213 uridylate kinase plant, putative                        233   4e-62
30074.m001348 uridylate kinase plant, putative                        169   8e-43
30147.m014199 uridylate kinase plant, putative                        148   1e-36

>29709.m001213 uridylate kinase plant, putative
          Length = 210

 Score =  233 bits (594), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 117/139 (84%), Positives = 122/139 (87%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
           TMIQNMIKEGKIVPSEVTIKLLQKAM+ESGNDKFLIDGFPRNEENRAAFESVTKI PEFV
Sbjct: 69  TMIQNMIKEGKIVPSEVTIKLLQKAMQESGNDKFLIDGFPRNEENRAAFESVTKIVPEFV 128

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            NQGR DDNIETIRKRF+VFLESSIPVVEYYESKG+VRKIDA K
Sbjct: 129 LFFDCSEEEMERRLLSRNQGRVDDNIETIRKRFKVFLESSIPVVEYYESKGKVRKIDAAK 188

Query: 142 SVEEVFEAVKSIFTQKDEK 160
           S+EEVFE VK+IF QKDEK
Sbjct: 189 SIEEVFEDVKAIFAQKDEK 207


>30074.m001348 uridylate kinase plant, putative
          Length = 301

 Score =  169 bits (427), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 107/146 (73%), Gaps = 2/146 (1%)

Query: 14  LDLKMGYRTMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESV 73
           LD + G  TMI+++IKEGK VPS+VT+++LQKA+ ESGNDKFL+DGFPR+EE R+AFE+ 
Sbjct: 135 LDAENG--TMIESIIKEGKSVPSDVTMRILQKAIDESGNDKFLLDGFPRDEEIRSAFETA 192

Query: 74  TKIEPEFVLFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGR 133
           T IEPE VLFFDC            N+GR DDN +++RKRF+ F E ++PVV+YY SKG 
Sbjct: 193 TNIEPELVLFFDCSAEEREKRILSRNEGRVDDNPDSLRKRFKYFEEHTLPVVDYYRSKGI 252

Query: 134 VRKIDAGKSVEEVFEAVKSIFTQKDE 159
           V ++DA K  EEVFE +KSI     E
Sbjct: 253 VSEVDAAKPTEEVFEKLKSILNPASE 278


>30147.m014199 uridylate kinase plant, putative
          Length = 298

 Score =  148 bits (373), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 90/134 (67%)

Query: 22  TMIQNMIKEGKIVPSEVTIKLLQKAMRESGNDKFLIDGFPRNEENRAAFESVTKIEPEFV 81
            MI N IKEG+IVPSEVT+KL++K M  S N KFLIDGFPR EENR AFE +   EP  V
Sbjct: 159 AMILNTIKEGRIVPSEVTVKLIKKEMELSDNSKFLIDGFPRTEENRIAFEHIIGAEPNIV 218

Query: 82  LFFDCXXXXXXXXXXXXNQGREDDNIETIRKRFRVFLESSIPVVEYYESKGRVRKIDAGK 141
           LFFDC            N+GR DDNI+TI+KR  VF   ++PV+ YY  KG++  I+A  
Sbjct: 219 LFFDCPQEEMVKRVLNRNEGRVDDNIDTIKKRLEVFSALNLPVIGYYSKKGKLHTINAVG 278

Query: 142 SVEEVFEAVKSIFT 155
           +V+E+FE V+ +F 
Sbjct: 279 TVDEIFEQVRPVFA 292