Jatropha Genome Database

JcCA0154181.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.30 + phase: 0 
         (161 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29681.m001337 undecaprenyl pyrophosphate synthetase, putative         202   6e-53
29830.m001441 undecaprenyl diphosphate synthase, putative              73   6e-14
28565.m000330 undecaprenyl diphosphate synthase, putative              66   6e-12
28565.m000328 undecaprenyl diphosphate synthase, putative              66   6e-12
28565.m000331 undecaprenyl diphosphate synthase, putative              66   7e-12

>29681.m001337 undecaprenyl pyrophosphate synthetase, putative
          Length = 310

 Score =  202 bits (514), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 125/166 (75%), Gaps = 8/166 (4%)

Query: 1   MKALNLSLPISAYNTQ--TLQNPKCFLSPNARNQSRPLHRRFPQLLATKTDLAV-KQED- 56
           M+AL L+LP+S YN    T Q PK F S   RNQSRPLH RF  LLAT TD+AV KQ D 
Sbjct: 1   MQALQLNLPLSIYNNTLTTPQTPKTFPS---RNQSRPLHGRFAPLLATNTDVAVIKQADI 57

Query: 57  -KSVIEDEIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKL 115
             +   D+ EPLP+ L  ELMPRHVA+IMDGNGRWA+Q+G   S GHEAG R+L +I+ L
Sbjct: 58  ATTSTSDDPEPLPDGLLLELMPRHVAVIMDGNGRWAKQQGWPPSKGHEAGVRSLMEIMNL 117

Query: 116 CWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           C  WGIKVLTVFAFSC+NWTRP+VE+DFLMSLFE+ LKSE+ N +R
Sbjct: 118 CGHWGIKVLTVFAFSCENWTRPKVEIDFLMSLFERVLKSELENLLR 163


>29830.m001441 undecaprenyl diphosphate synthase, putative
          Length = 381

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+A+++      GH AG   L  I+K C++ G+K +TV+AFS DN+ 
Sbjct: 33  IPNHIAFIMDGNRRYAKKENMKEGAGHRAGFSALISILKYCYELGVKYVTVYAFSIDNFK 92

Query: 136 RPQVEVDFLMSL 147
           R   EV  LM L
Sbjct: 93  RRPDEVQDLMDL 104


>28565.m000330 undecaprenyl diphosphate synthase, putative
          Length = 370

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+++IMDGN R+ +++      G+ AG   L  ++K C++ G+K +T+FAF  DN+ 
Sbjct: 33  IPSHLSVIMDGNRRFTKKENLKPGAGYRAGFSALMSMLKYCYELGVKYVTIFAFGIDNFK 92

Query: 136 RPQVEVDFLMSL-FEKSL 152
           R   EV  +M L  EK+L
Sbjct: 93  RRSDEVQVIMDLMLEKTL 110


>28565.m000328 undecaprenyl diphosphate synthase, putative
          Length = 331

 Score = 66.2 bits (160), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 46/73 (63%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H++ +MDGN R+A+++      GH+AG   L  I+K C+   +K +TV+AFS +N+ 
Sbjct: 25  IPGHLSFLMDGNRRFAKKENLETGAGHKAGSSALITILKYCYDLRVKYVTVYAFSIENFN 84

Query: 136 RPQVEVDFLMSLF 148
           RP  EV  +M L 
Sbjct: 85  RPPHEVQTVMDLM 97


>28565.m000331 undecaprenyl diphosphate synthase, putative
          Length = 363

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 1/83 (1%)

Query: 71  LRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFS 130
           LR   +P H++ IMDGN R+ +++      G+ AG   L  ++K C++ G+K +T+FAF 
Sbjct: 20  LRMGPIPSHLSFIMDGNRRFTKKENLKPGAGYRAGFLALMSMLKYCYELGVKHVTIFAFG 79

Query: 131 CDNWTRPQVEVDFLMSL-FEKSL 152
            DN+ R   EV F+M L  EK+L
Sbjct: 80  IDNFKRRPDEVRFIMDLILEKTL 102