Jatropha Genome Database

JcCA0154071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154071.10 + phase: 2 /partial
         (141 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        284   9e-78
30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        165   8e-42
29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        159   3e-40
29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        127   2e-30
29610.m000411 Coronatine-insensitive protein, putative                 59   9e-10

>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 585

 Score =  284 bits (727), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 135/141 (95%), Positives = 140/141 (99%)

Query: 1   DRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCENLRKLEIRDCPFGDKALLANAAK 60
           DRVFEYIGT+AKKLEMLSVAFAGDSDLGLHHV+SGCENLRKLEIRDCPFGDKALLANAAK
Sbjct: 445 DRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVLSGCENLRKLEIRDCPFGDKALLANAAK 504

Query: 61  LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESCPVEKLYIYRTVAG 120
           LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPD+RPESCPVEKLYIYR+VAG
Sbjct: 505 LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDTRPESCPVEKLYIYRSVAG 564

Query: 121 PRFDMPGFVWTMDEDSALRLS 141
           PRFDMPGFV+TMDEDSALR S
Sbjct: 565 PRFDMPGFVYTMDEDSALRFS 585


>30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 571

 Score =  165 bits (417), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 101/133 (75%), Gaps = 1/133 (0%)

Query: 1   DRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCENLRKLEIRDCPFGDKALLANAAK 60
           D+VF YIG YA+ LEMLS+AFAG+SD G+ +V++GC+ LRKLEIRD PFG+ ALL +  K
Sbjct: 439 DQVFLYIGMYAEHLEMLSIAFAGNSDKGMQYVLNGCKKLRKLEIRDSPFGNAALLMDVGK 498

Query: 61  LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPD-SRPESCPVEKLYIYRTVA 119
            ETMRSLWMSSC V+ G CK L +KMP LNVE+++E    D S  ++  V+K+Y+YRT+ 
Sbjct: 499 YETMRSLWMSSCEVTLGGCKTLAKKMPWLNVEIMNENEQADFSADDTQKVDKMYLYRTLV 558

Query: 120 GPRFDMPGFVWTM 132
           G R D P FVWT+
Sbjct: 559 GHRNDAPDFVWTL 571


>29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 589

 Score =  159 bits (403), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 95/132 (71%), Gaps = 5/132 (3%)

Query: 1   DRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCENLRKLEIRDCPFGDKALLANAAK 60
           D  FEYIG YAK LE LSVAFAG SD G+  V+ GC  LRKLEIRDCPFG+ ALL+   K
Sbjct: 460 DLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPKLRKLEIRDCPFGNAALLSGLEK 519

Query: 61  LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESCPVEKLYIYRTVAG 120
            E+MRSLWMSSC+V+   C+LL ++MPRLNVEV+ E G  DS+      +K+Y+YR+VAG
Sbjct: 520 YESMRSLWMSSCNVTMNGCRLLAREMPRLNVEVMKEDGSDDSQ-----ADKVYVYRSVAG 574

Query: 121 PRFDMPGFVWTM 132
           PR D P  V  +
Sbjct: 575 PRRDAPSTVLNL 586


>29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 635

 Score =  127 bits (318), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 3/129 (2%)

Query: 1   DRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCENLRKLEIRDCPFGDKALLANAAK 60
           DR F YIG Y K +  LSVAFAGDSD+GL +++ GC  L+KLEIRD PFGD ALL+    
Sbjct: 507 DRAFSYIGEYGKTVRTLSVAFAGDSDMGLKYLLEGCPKLQKLEIRDSPFGDGALLSGLHH 566

Query: 61  LETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESCPVEKLYIYRTVAG 120
              MR LWMS+C ++   C+ + +++P L VEVI+     D       V+ LY+YR++ G
Sbjct: 567 YYNMRFLWMSACKLTRNGCQQIARELPGLVVEVINHEYDEDMENF---VDTLYMYRSLEG 623

Query: 121 PRFDMPGFV 129
           PR D P FV
Sbjct: 624 PRDDAPKFV 632


>29610.m000411 Coronatine-insensitive protein, putative
          Length = 602

 Score = 58.5 bits (140), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 6/130 (4%)

Query: 6   YIGTYAKKLEMLSVAFAGDSDLGLHHVMSGCENLRKLEIRDCPFGDKALLANAAKLETMR 65
           YIG Y+  +  + + + G+SD GL     GC +L+KLE+R C F ++AL     +L ++R
Sbjct: 465 YIGEYSPNVRWMLLGYVGESDEGLLAFSKGCPSLQKLEMRGCCFTERALARAVMQLTSLR 524

Query: 66  SLWMSSC-SVSYGACKLLGQKMPRLNVEVIDERGPPDSRPESCP--VEK---LYIYRTVA 119
            LW+    + S    +LL    P  N+E+I  R        +    VE+   +  Y ++A
Sbjct: 525 YLWVQGYRASSVPGRELLAMARPFWNIELIPPRRVVVVNQVNEDVLVEQPAHILAYYSLA 584

Query: 120 GPRFDMPGFV 129
           G R D P  V
Sbjct: 585 GARTDFPDSV 594