Jatropha Genome Database

JcCA0153671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153671.20 - phase: 0 
         (279 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29755.m000441 NADH-cytochrome B5 reductase, putative                  538   e-154
29818.m000392 NADH-cytochrome B5 reductase, putative                  387   e-108
28320.m001101 NADH-cytochrome B5 reductase, putative                  213   9e-56
29908.m006209 nitrate reductase, putative                             182   2e-46

>29755.m000441 NADH-cytochrome B5 reductase, putative
          Length = 279

 Score =  538 bits (1387), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 252/279 (90%), Positives = 266/279 (95%)

Query: 1   MESLHSHKAEMISIAVALFAIGAGTAYYLYITSKKPKGCLDPQNFKEFKLVKRTQLSHNV 60
           M+SL SHKAEMISIAVAL A+GAGTAYY Y+TSKKPKGCLDP+NFKEFKLVKRT+LSHNV
Sbjct: 1   MDSLQSHKAEMISIAVALLAVGAGTAYYFYLTSKKPKGCLDPENFKEFKLVKRTELSHNV 60

Query: 61  AKFKFALPTPTSVLGLPIGQHMSCRGKDSLGEEVAKPYTPTTLDSDLGYFELVIKMYPQG 120
           A FKFALP PTSVLGLPIGQHMSCRGKDSLGE+V KPYTPTTLDSD+GYFELVIKMYP+G
Sbjct: 61  ASFKFALPLPTSVLGLPIGQHMSCRGKDSLGEDVVKPYTPTTLDSDVGYFELVIKMYPKG 120

Query: 121 RMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAILENPNDK 180
           RMSHHFREMREGDYLAVKGPKGRFKYQPNQVR FGMLAGGTGITPMFQV RAILENP+DK
Sbjct: 121 RMSHHFREMREGDYLAVKGPKGRFKYQPNQVRAFGMLAGGTGITPMFQVARAILENPSDK 180

Query: 181 TNIHLIYANVTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKEMIEKH 240
           TNIHLIYANVTY DILLKEELDNLA+NFPNRFSVYYVLN+PPEGWDGG+GFVSKEMI+ H
Sbjct: 181 TNIHLIYANVTYGDILLKEELDNLAHNFPNRFSVYYVLNEPPEGWDGGVGFVSKEMIQHH 240

Query: 241 CPAPAPDVQILRCGPPPMNKAMAAHLEALGYTSQMQFQF 279
           CP PA DVQILRCGPPPMNKAMAAHL ALGYTS+MQFQF
Sbjct: 241 CPPPASDVQILRCGPPPMNKAMAAHLNALGYTSEMQFQF 279


>29818.m000392 NADH-cytochrome B5 reductase, putative
          Length = 258

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/249 (75%), Positives = 203/249 (81%), Gaps = 22/249 (8%)

Query: 31  ITSKKPKGCLDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHMSCRGKDSL 90
            ++KKPKGCLDP+NFK+FKLVKRTQLSHNVAKF F LPTPTSVLGLPIGQH+SCRGKDS 
Sbjct: 32  FSAKKPKGCLDPENFKDFKLVKRTQLSHNVAKFTFELPTPTSVLGLPIGQHISCRGKDSQ 91

Query: 91  GEEVAKPYTPTTLDSDLGYFELVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQ 150
           GEEV KPYTPTTLDSD+G+FELVIKMYPQGRMSHHFREMR GD+L+VKGPKGRF+YQP Q
Sbjct: 92  GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDHLSVKGPKGRFRYQPGQ 151

Query: 151 VRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLKEELDNLANNFPN 210
           VR FGMLAGG+GITPMFQV RAILENP D+T +HLIYANVTYEDILLKEELD LA N+PN
Sbjct: 152 VRAFGMLAGGSGITPMFQVARAILENPKDQTKVHLIYANVTYEDILLKEELDGLAANYPN 211

Query: 211 RFSVYYVLNQPPEGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPPMNKAMAAHLEALG 270
           RF VYYVLNQPPE WDG       EM                    PMNKAM  HLEALG
Sbjct: 212 RFKVYYVLNQPPEVWDG-----DSEMWTT-----------------PMNKAMVGHLEALG 249

Query: 271 YTSQMQFQF 279
           Y  +MQFQF
Sbjct: 250 YAPEMQFQF 258


>28320.m001101 NADH-cytochrome B5 reductase, putative
          Length = 324

 Score =  213 bits (542), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 169/297 (56%), Gaps = 33/297 (11%)

Query: 14  IAVALFAIGAGTAYYLYITSK-------------KPKGCLDPQNFKEFKLVKRTQLSHNV 60
           I +   A  +G   YLY  S               PK  L P  + EFKL    ++SHN 
Sbjct: 30  IPIGAIAAASGGISYLYYYSSPNLAYLDEVKEDAGPKVALKPDKWIEFKLQDTARVSHNT 89

Query: 61  AKFKFALPTPTSVLGLPIGQHMSCR---GKDSLGEE--VAKPYTPTTLDSDLGYFELVIK 115
             F+F+   P++ LGL I   +  R   G D+ G+   V +PYTP +     GYF+L+IK
Sbjct: 90  QLFRFSF-DPSAKLGLDIASCILTRAPLGHDAEGKTKYVIRPYTPISDPDAKGYFDLLIK 148

Query: 116 MYPQGRMSHHFREMREGDYLAVKGPKGRFKYQPNQVRVFGMLAGGTGITPMFQVTRAILE 175
           +YP+G+MS HF  ++ GD + VKGP  + +Y PN  +  GM+AGG+GITPM Q+  AIL+
Sbjct: 149 VYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGSGITPMLQIIEAILK 208

Query: 176 NPNDKTNIHLIYANVTYEDILLKEELDNLANNFPNRFSVYYVLNQPPEGWDGGIGFVSKE 235
           NP+D T + L+Y N++ +DILL+++LD LA + PN F V+Y +  P + W GG+G+VSK+
Sbjct: 209 NPDDNTQVTLLYGNISPDDILLQQKLDFLAASHPN-FKVFYTVENPSKNWKGGVGYVSKD 267

Query: 236 MIEKHCPAPAPDVQILRCGPPPMNKAMAAH-------------LEALGYTSQMQFQF 279
           M  K  P P+ D  IL CGP  M + ++               L+ LGYT QM ++F
Sbjct: 268 MALKGLPGPSNDTLILVCGPSGMMEHISGSKAKDYSQGELTGLLKELGYTEQMVYKF 324


>29908.m006209 nitrate reductase, putative
          Length = 914

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/254 (40%), Positives = 151/254 (59%), Gaps = 24/254 (9%)

Query: 40  LDPQNFKEFKLVKRTQLSHNVAKFKFALPTPTSVLGLPIGQHM-SCRGKDSLGEEVAKPY 98
           L P+     KLVK+  LSH+V  F+FALP+   VLGLP+G+H+  C   D   +   + Y
Sbjct: 654 LVPREKIACKLVKKESLSHDVRLFRFALPSDDQVLGLPVGKHIFLCATIDE--KLCMRAY 711

Query: 99  TPTTLDSDLGYFELVIKMY-----PQ----GRMSHHFREMREGDYLAVKGPKGRFKY--- 146
           TPT+    +GYF+LVIK+Y     P+    G MS H   ++ G  + VKGP G  +Y   
Sbjct: 712 TPTSTIDVVGYFDLVIKVYFKGVHPKFPNGGLMSQHLDSLQLGSVIDVKGPLGHIEYAGR 771

Query: 147 -------QPNQVRVFGMLAGGTGITPMFQVTRAILENPNDKTNIHLIYANVTYEDILLKE 199
                  +P   +   MLAGGTGITP++QV +AIL++P D T ++++YAN T +DILL+E
Sbjct: 772 GNFMVHGKPKFAKKLTMLAGGTGITPIYQVIQAILKDPEDDTEMYVVYANRTEDDILLRE 831

Query: 200 ELDNLANNFPNRFSVYYVLNQP-PEGWDGGIGFVSKEMIEKHCPAPAPDVQILRCGPPPM 258
           ELD+ A     R  V+YV+ +   EGW   +GF+++ ++ +H P  + D   L CGPPPM
Sbjct: 832 ELDSWAKEHHERLKVWYVVQESIKEGWQYSVGFITENILREHVPEGSDDTLALACGPPPM 891

Query: 259 NK-AMAAHLEALGY 271
            + A+  +LE + Y
Sbjct: 892 IQFAVQPNLEKMNY 905