Jatropha Genome Database

JcCA0153521.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153521.20 + phase: 0 
         (226 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004747 oligopeptidase, putative                                391   e-109

>29929.m004747 oligopeptidase, putative
          Length = 233

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/230 (85%), Positives = 210/230 (91%), Gaps = 4/230 (1%)

Query: 1   MEVGLSLNALVRLPLSNSSRTH-EDVLVKHSLFTSRTG--QKSQHRKTLLVVNAKGKRGM 57
           MEVGLSLNALVRLPLSNSSR H ED + KH+LF++RT   QKS  ++TLLVV AKGKRGM
Sbjct: 1   MEVGLSLNALVRLPLSNSSRIHHEDGVAKHTLFSTRTVTLQKSLKKQTLLVVKAKGKRGM 60

Query: 58  QARQFQRPPAPSLPKIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKITVAAKDNFLG 117
           Q+RQFQRPPAPSLPKIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKI VAAKDNFLG
Sbjct: 61  QSRQFQRPPAPSLPKIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKIMVAAKDNFLG 120

Query: 118 KYIYKDTLARNLAAVIYRDEKEIQKTAFKQYRVLRSATEFRYGYKLVENGNMRAALSTSD 177
           KYIYK+TL RNLAAVIYRDEKEIQKTAFKQ+RVLRSATEFRYGYKLVENGN+RAALST+D
Sbjct: 121 KYIYKNTLDRNLAAVIYRDEKEIQKTAFKQFRVLRSATEFRYGYKLVENGNVRAALSTTD 180

Query: 178 VIELPTEDQLKTVFDKVKDFFGGAKESFGKLTALNS-AEETEEVSKENTK 226
           VIELPT DQLKTV DKVKDFFG AKESFGKLTAL+S  +E EEVSKE  K
Sbjct: 181 VIELPTPDQLKTVVDKVKDFFGDAKESFGKLTALDSTTDEPEEVSKEKAK 230