Jatropha Genome Database

JcCA0153501.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153501.20 + phase: 0 /pseudo/partial
         (196 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002027 sodium/hydrogen exchanger, putative                     249   7e-67
29726.m003982 sodium/hydrogen exchanger, putative                     211   2e-55
30128.m008667 sodium/hydrogen exchanger, putative                     209   9e-55
30128.m008729 sodium/hydrogen exchanger, putative                     170   3e-43
27613.m000616 sodium/hydrogen exchanger, putative                     158   1e-39

>29647.m002027 sodium/hydrogen exchanger, putative
          Length = 536

 Score =  249 bits (635), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 125/172 (72%), Positives = 143/172 (83%), Gaps = 1/172 (0%)

Query: 1   MGFNLGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGL 60
           MG +L S V++LGL+SG DE H+DSITLFV L+CACI+IGHL EKNRWMNESITAL IGL
Sbjct: 1   MGLSLVS-VMKLGLRSGPDEAHIDSITLFVALLCACILIGHLFEKNRWMNESITALVIGL 59

Query: 61  CTGVIILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVG 120
           CTGVIILL T+GKSSHLF F E LFFIYVLPPIIFNAGFQVKKKQFFRNF+TI+LFG VG
Sbjct: 60  CTGVIILLATEGKSSHLFQFSEELFFIYVLPPIIFNAGFQVKKKQFFRNFITIMLFGVVG 119

Query: 121 TLISFIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           TLISFIIIS+G+ +LFK L IDFLDT+DYL   A+    + VC+L  +   E
Sbjct: 120 TLISFIIISLGAVQLFKTLGIDFLDTMDYLALGAIFSATDSVCTLQVLNQEE 171


>29726.m003982 sodium/hydrogen exchanger, putative
          Length = 541

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/172 (63%), Positives = 129/172 (75%)

Query: 1   MGFNLGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGL 60
           M F + S+  +     GSD   V SI LFV L+CACI++GHLLE+NRW+NESITALAIGL
Sbjct: 1   MAFGVDSVFSKSVATVGSDHSSVVSINLFVALLCACIVVGHLLEENRWINESITALAIGL 60

Query: 61  CTGVIILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVG 120
           CTG++ILLTT GKSS L +F E LFFIY+LPPIIFNAGFQVKKKQFFRNFMTI+LFGAVG
Sbjct: 61  CTGIVILLTTGGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIILFGAVG 120

Query: 121 TLISFIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           TLIS  +ISVG+   F+KLNI  LD  DYL   A+    + VC+L  +   E
Sbjct: 121 TLISTGVISVGAMHFFQKLNIGSLDIGDYLAIGAIFSATDSVCTLQVLNQDE 172


>30128.m008667 sodium/hydrogen exchanger, putative
          Length = 544

 Score =  209 bits (531), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 107/172 (62%), Positives = 133/172 (77%)

Query: 1   MGFNLGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGL 60
           M  ++G L+ RL + S SD   V S++LFVTL+CACI+IGHLLE+NRWMNESITAL IGL
Sbjct: 1   MESHIGLLMSRLNMLSTSDHASVVSMSLFVTLLCACIVIGHLLEENRWMNESITALVIGL 60

Query: 61  CTGVIILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVG 120
            TG++ILL + GKSSHL +F E LFFIY+LPPIIFNAGFQVKKKQFFRNF+TI+LFGA+G
Sbjct: 61  GTGIVILLISGGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFITIMLFGAIG 120

Query: 121 TLISFIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           TLIS  +IS+G+ + FKKL+I  LD  DYL   A+    + VC+L  +   E
Sbjct: 121 TLISCCVISIGAVQFFKKLDIGQLDIGDYLAIGAIFAATDSVCTLQVLNQDE 172


>30128.m008729 sodium/hydrogen exchanger, putative
          Length = 709

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/148 (56%), Positives = 112/148 (75%)

Query: 25  SITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHLFLFDEHL 84
           ++++F  L+CACIIIGHLLE+NRW NESITAL +GLC G ++LL T+GK+S L +F E L
Sbjct: 193 ALSVFFALLCACIIIGHLLEENRWANESITALLLGLCAGGVVLLITKGKNSRLLVFSEDL 252

Query: 85  FFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFKKLNIDFL 144
           FF+Y+LPPIIFNAGFQVKKK FF+NF TI+LFG +GT+ISF +IS+G+  LFK++    +
Sbjct: 253 FFLYLLPPIIFNAGFQVKKKHFFKNFTTILLFGILGTVISFCLISLGAFLLFKRIGFTSM 312

Query: 145 DTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           D  D+L   A+    + VC+L  +   E
Sbjct: 313 DIQDFLAAGAILSATDSVCTLQVLSQDE 340


>27613.m000616 sodium/hydrogen exchanger, putative
          Length = 520

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/147 (55%), Positives = 106/147 (72%)

Query: 19  DEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHLF 78
           +   V  +TLFV ++C C++IGHLLE+NRW+NESITA+ +G   G+ IL+ ++GKSSH+ 
Sbjct: 14  EHAQVVPLTLFVAVLCLCLVIGHLLEENRWVNESITAIIMGCVCGIFILVLSKGKSSHIL 73

Query: 79  LFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFKK 138
            F+E LFFIY+LPPIIFNAGFQVKKKQFF+NF+TI+LFG VG  IS +II  GS   F  
Sbjct: 74  RFNEELFFIYLLPPIIFNAGFQVKKKQFFQNFITIMLFGVVGVFISALIIVAGSRWTFPG 133

Query: 139 LNIDFLDTVDYLGTLAL*FL*NYVCSL 165
           L +  L   DYL   A+    + VC+L
Sbjct: 134 LGLLGLTGRDYLAIGAIFSSTDTVCTL 160